Gene Csal_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2407 
Symbol 
ID4026844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2701315 
End bp2702700 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content66% 
IMG OID637967609 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_574453 
Protein GI92114525 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACC CTGCTGCTAC GCCCGTGATG CTCGTCGACG ATGAAGCTCA CTTGCGCATT 
ACCGCCAGCC AGACCCTCGA ACTGGCGGGC TACGTACCCG AGGTCTACGA AAGCGCCGAG
GCGGCGCTGA GTGCCCTGCG GGCGGATTTC CCCGGCGTGC TGGTCAGCGA CATCCGCATG
CCCGGCATGG ACGGCATGGC CCTGCTGCGC GAAATTCGTC AGCGCGATCC CGACCTGCCC
GTGGTACTGA TCACCGGCCA CGGCGACATT TCCACGGCCG TGGAAGCCAT GCGCGATGGC
GCCTGGGATT TCCTCGAGAA GCCCTTCGCC GGGGAGCGGC TGGTGGAGGT GGTGCGGCGG
GGCATCGAAA AACGCCGCTT GAGCCTGGAG AACCGGCATC TGAAGGCCGA ACTCGAGGCG
CAGCAGTCCA CCCCGGGGCC TCGCCTGGTC GGCCGGACGC CGGCCATTCA GCAACTGGCC
TCGATGGTCC AGCGCATCAG CCAGGTCGAG ACCGACGTGC TGCTCTTCGG CGAGACCGGT
ACAGGCAAGG ATCTGGTGGC ACGGGCGATT CACGAGCGCA GCGCCCGCGG CGGCAAGCCG
TTCGTCGCCA TCAATTGCGG CGCGGTGCCG GAAAGCACGA TCGAGTCGGA ACTCTTCGGC
CATGAAAAGG GGGCCTTCAC CGGGGCCGTG GAACGCCGCG TGGGGAAGTT CGAACACGCC
AACGGCGGGA CCGTCTTCCT CGACGAGATC GAATCGATGC CGCTGTCGCT TCAGGTCAAG
CTGCTGCGCG TGCTGCAGGA ACGCGCCGTG GAACGCCTGG GCTCCAACAC CCTGATCCCG
CTCGACATCC GGGTCATCGC CGCGACCAAG ACGGATCTCA AGGCGGCCGC CGACACCGGC
GGGTTCCGGG AGGACCTTTA CTATCGTCTC AACGTCGTGA CCCTGCCGAT TCCCTCGCTG
CGCGAGCGTC GTGAGGATAT TCCGCTGCTG TTCCAGCACT TCATCGCGGT CTCCGCCAGT
CGCAGCGGAC TGGAAGCCCC GCCGCTCGAT GGTCATGGGA TCTCCGCCCT GCTCGCTCAC
GACTGGCCGG GCAACGTGCG CGAATTGCGC AACGTGGCCG AGCGCTATGT GCTGCTGGGC
GCCACCTGCG ATTACCGACT CGAGACCCTG CTCCAGGGCG CGCAGAAGGA CAGCGGCGAG
CTGCCCCTGG CGCAGCAGGT GGAGCTGTTC GAAAAGAGCG TGATCAACCA TGCCCTGGTG
CGCTATCAGG GGTGCGTGCC GGATATCTGC GAGCGACTCG GCGTGCCGCG CAAGACGCTG
TACGACAAGC TCAAGAAGCA TGGACTGAAG GCCGACGACT ATCGCCATAT CGCGGAAACG
GAATGA
 
Protein sequence
MHDPAATPVM LVDDEAHLRI TASQTLELAG YVPEVYESAE AALSALRADF PGVLVSDIRM 
PGMDGMALLR EIRQRDPDLP VVLITGHGDI STAVEAMRDG AWDFLEKPFA GERLVEVVRR
GIEKRRLSLE NRHLKAELEA QQSTPGPRLV GRTPAIQQLA SMVQRISQVE TDVLLFGETG
TGKDLVARAI HERSARGGKP FVAINCGAVP ESTIESELFG HEKGAFTGAV ERRVGKFEHA
NGGTVFLDEI ESMPLSLQVK LLRVLQERAV ERLGSNTLIP LDIRVIAATK TDLKAAADTG
GFREDLYYRL NVVTLPIPSL RERREDIPLL FQHFIAVSAS RSGLEAPPLD GHGISALLAH
DWPGNVRELR NVAERYVLLG ATCDYRLETL LQGAQKDSGE LPLAQQVELF EKSVINHALV
RYQGCVPDIC ERLGVPRKTL YDKLKKHGLK ADDYRHIAET E