Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0161 |
Symbol | |
ID | 5411541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 155446 |
End bp | 158565 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867376 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001403327 |
Protein GI | 154149709 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCCG TAGTCTGTGT TGACGACGAA CCGGATCTCC TAGAAATAGC CCGGCTTTTC CTGGAACGCT CCGGTGAAAT CGACGCCATG TCTTTTGTTT CTGCACAGGA AGCGCTGGAC TCTCCCGCGA TACTATCCTG CGATATCGTT GTCTCCGATT ACCAGATGCC GGGTATGGAT GGGATCGCAT TCTTAAAAGA GGTCAGGATG CGGTTTGGAG ATCTCCCGTT CATCCTCTTC ACCGGCCGGG GCCGGGAGGA GATCGTGATT GAGGCGATCA ACAATGGTGC GGACTTTTAC CTCCAGAAAG GCGGGGATCC GACCGCCCAG TTTGCCGAGC TCCTGCATAA GATCCGGCAG GCCGTGCGCA GGAAAGAGGC CGAACGCTCG CAGCACGAAT CGGAGCAGCG TCTTGCGAAT ATCATTGATT TCCTTCCTGA TGCAATTCTT GCGGTTGATC GGACCGGCCG CGTAATTGCG TGGAACCGTA CCAACGAGAA TATTACCGGG GTTCCGGCAT CCGGGATTCT GGGGAAAGGG GACTACGAGT ACGCCCTGTC AACGTACGGG GAGCGGCGAC CCTTCCTCCT TGACATGATC TATGAGCCTG ATGAGAAGAT CCTGAAATAC TATACTAATA TCGTGCATGA TGGCGGCGCG ATCAGCGCAG AGACCAGTCT CGCAGCTCCA AAAGGCAGAC GGATCGACAT CATGGCAAAG GCAAGCCCCC TCTATAACCA GAAAGGGGAG GTCACCGGTG CTATCGAGGT CATACGGGAT ATTACGGCCC TAAAAAAGAT CGAGCAGGAC CTCAGGGCAG CATACGAACG GGTCACGCTG ACGGAAGAAG AGCTGCGGAC CCAGTACGAG GAGCTCAGGC AGACCAACGA ACAGCTCTCG GCCACGGAGG AGGAACTCAC CTGCCAGGTG AATAAGCTGG CCCATAGCGA ACAGGTACTC CGGGTAAACG AGGAGCGGCT GGCCATGGCA CAGGCTGTCG GCCGGACCGG CAGCTGGGAG TACCGGTTAG ATACCGGCAC GATCTGGGGC TCTGCAGAAG GCCTCCGCAT CTTCGGCTAT CCGGCAACAG CCCGGGATCT CCCGATAGAA GATATCGAAT CCTGCATCCC GGAACGGGAG CGGGTCCACC AGGCCCTCGT GGACCTGATC GCCTCCGGGA AGGACTATGA TCTCGAATAT ACTATCCGTC CTGCAGATGG ATCGGGCCCG AAAGTGATCC ACTCTGTTGC CCGGCTCGAA AGGGATGCCC GGGGCATTCC GGTGCGGGTC ATCGGTGTCA TCCAGGACAC CACCGAGCGC AGGAAGGCCT ATGAGGACAT CGCGTTCAAG AATACCCTGC TTGCCACCCA ACAGGAGACT GCTCCCGATG GTATCCTGAT CGTGGATGAA ACCGGGAAGA TCCTCAGTTA CAACCGGAAA TTTGCTGAGC TCTGGAAGAT CCCCCAGGAA CTCATCGAGC AGGGTCGTGA TGTACTGCTG CTTCAGCAGG TTAATGGCCA GCTGGTCGAT CCTGAAAAAT TCCTTGCCCG GGTCCGGTAC CTGTACGAGC ATAATGATGA GAAGAGTTTC GAGGAATTGT CCCTTCGTGA CGGACGGATA CTGGAGCGCT TTTCATCGCC GGTATTCGGG GAGAATAAAA AATACTATGG GCGGATATGG TACTTCCGGG ATATCACCGG ACGCCGGAAT GCCGACAAAG CAGTACTGGA ATCTGAAAAG AAATTTGCTA CGGTCTTTAA AAGCAGCCCG ATTGCGCTCA CGCTCGTTTC GGCAACTGAC GGGACATTTT TCGATGTCAA TGATGCATTC CTCAAGGATA CCGGTTATAC CCGGGAGGAG GTAATCGGGA AAACTGCAGA GGATCTGAGG CTGTTTTCCG ACGCCCGGGA GCGCGAGAAT CTGATCTCCG TGCTACAGAC CGGAAAGTCT GTTTACGGGA TGGATCTGCA GTGCCGGGGA AAATCCGGGG AGATACGGAC CTGCCGGTTC ACCTCTCAGC TCCTCACGAT TGACAACAAA GCGTTCCGTC TTTTTACATC GGAAGATATT ACGGAACGTA AGCACTCCGA AGAGGCACGA AGGGAGAGCG AGAAGAGGTT CCGGGATCTC GTGGAAACCC TGCCTGATAT TGTCTGGGAG ATCGATCTGC AGGGGAAAAT CCGGTACATC AGCCCTACGG TCGAAAGGGT CATGGGTTAT ACACCGGAGG AACTCGAAGG CGGTCTGACC TCTGACCTGG TTGCAGAGCA GAGAAGGGAT TTTGCCCGCC GTGAGCTGGG AAAGTACATT TCTAACGACA GTCCCCTTGT CCCCTTCGAA ATTCCTGCCC GCCACTGCGA CGGGCATGAA ATGATGGTAG AGATCCGTGC ATCACGGGTC AAAGACAGCG AAGGGAAGGT AACCGGATTT CGGGGGGTGA CCACCGATGT CACCCGGCGC TGGAAATCCG AAGAGGCGCT CCGGCGTGCA AACCGCCAGC TCACCCTCCT TGGCAGCGTT ACCCGGCACG ATGTCCTCAA CCGGATTACG GTACTTTTAG GTTATCTTGC CATTGTCAAG AGGAAGTGCA CGGATCCCGG CCAGGAGGCG TACCTGCAAA AGATGGAGTC TGCCATAGAT CTGTTAAGGG CTCAGATGGA GTTTACCCGG ATTTACCAGG ATGTCGGATC CCACGAACCG CGGTGGATCG AACTCGAAGC GGTGATACCC CGGGACCAGG TTCCGGAAAT GGTCTCCCTG GTTCCGGATG TACAGGGATT CCGGGTATAT GCAGACGCGA TGTTCGAGAA AGTGTTTGCC AACCTCCTCG ACAACTCGAT CCGGCACGGG GGACATGTGA CAGAGATCCG GGTAACGTGC CACCCGGAGG GTACGGCTTT GGTGATTGCC TGGGAAGACA ATGGTGTTGG TGTCAGGGCC GGCAAAAAGG AGCAGATATT CCGGCAGGGC GTGGGATCAA ACACCGGCCT TGGCCTCTTT TTGATCCGGG AGATCCTTGC CCTGACCGGC ATCGAAATCC GGGAGACCGG CGAACCCGGC AGCGGCGCCA GGTTTGAGAT CGTGGTGCCG GAAGGCTTGT ACCTGCCAGC CCGCACCTGA
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Protein sequence | MISVVCVDDE PDLLEIARLF LERSGEIDAM SFVSAQEALD SPAILSCDIV VSDYQMPGMD GIAFLKEVRM RFGDLPFILF TGRGREEIVI EAINNGADFY LQKGGDPTAQ FAELLHKIRQ AVRRKEAERS QHESEQRLAN IIDFLPDAIL AVDRTGRVIA WNRTNENITG VPASGILGKG DYEYALSTYG ERRPFLLDMI YEPDEKILKY YTNIVHDGGA ISAETSLAAP KGRRIDIMAK ASPLYNQKGE VTGAIEVIRD ITALKKIEQD LRAAYERVTL TEEELRTQYE ELRQTNEQLS ATEEELTCQV NKLAHSEQVL RVNEERLAMA QAVGRTGSWE YRLDTGTIWG SAEGLRIFGY PATARDLPIE DIESCIPERE RVHQALVDLI ASGKDYDLEY TIRPADGSGP KVIHSVARLE RDARGIPVRV IGVIQDTTER RKAYEDIAFK NTLLATQQET APDGILIVDE TGKILSYNRK FAELWKIPQE LIEQGRDVLL LQQVNGQLVD PEKFLARVRY LYEHNDEKSF EELSLRDGRI LERFSSPVFG ENKKYYGRIW YFRDITGRRN ADKAVLESEK KFATVFKSSP IALTLVSATD GTFFDVNDAF LKDTGYTREE VIGKTAEDLR LFSDAREREN LISVLQTGKS VYGMDLQCRG KSGEIRTCRF TSQLLTIDNK AFRLFTSEDI TERKHSEEAR RESEKRFRDL VETLPDIVWE IDLQGKIRYI SPTVERVMGY TPEELEGGLT SDLVAEQRRD FARRELGKYI SNDSPLVPFE IPARHCDGHE MMVEIRASRV KDSEGKVTGF RGVTTDVTRR WKSEEALRRA NRQLTLLGSV TRHDVLNRIT VLLGYLAIVK RKCTDPGQEA YLQKMESAID LLRAQMEFTR IYQDVGSHEP RWIELEAVIP RDQVPEMVSL VPDVQGFRVY ADAMFEKVFA NLLDNSIRHG GHVTEIRVTC HPEGTALVIA WEDNGVGVRA GKKEQIFRQG VGSNTGLGLF LIREILALTG IEIRETGEPG SGARFEIVVP EGLYLPART
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