| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1070 |
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| Symbol | |
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| ID | 7270986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1105900 |
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| End bp | 1110180 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643569705 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002466139 |
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| Protein GI | 219851707 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.632131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.158919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG GCGTGAGAGT CCTCTATGTC GATGACGAAC CGGCTCTCCT CGAAATTGGA
AAGATATTCC TGGAACGTTC CGGGGAGTTT CATATAGGAA CCTTCCTATC TGCACAGGAA
GCACTGGCCT CCCCGTCAAT TCAGTTGTGG GATGTCATCG TCTCTGACTA CCAGATGCCA
GGTATGGACG GGATCGCATT TCTAAAAACG GTCCGGAAAC GGTTTGGCGA TATCCCGTTC
ATCCTCTTCA CCGGCCGGGG CCGCGAAGAG GTTGTGATCG ATGCGATCAA CAACGGTGCG
GATTTCTATC TCCAGAAAGG CGGCGACTCA CGGGCCCAGT TCGCCGAGTT ATCCCACAAG
ATTCGGCAGG TTGTACGCCG GCGGGATGCG GAGCGGGAAC TGCGGAAGAG CGAGGACCGG
TATCGCTCCA TAGTCAACGA CCAGACGGAT ATGATCGTTC GTTTCACTGC TGATGGCACG
GTCACGTTCG CCAACGAAGC CTTTCATCAG TATTATCATG CCATACTGGG GTTCACCGAG
ATTGAGGGAG AGAAGATCCA CGACCTCGTG CAGGTGGGGA ATTATCAGAA TATGGATACT
ATTCTTAGAT CACTCACCCC CAAAACGCCA ATATTACATC ATATCGAATA CCAGGTCAAG
GACAGGGACA ATACGACGTA CTGGCAAACT TGGTCGGTCC GGGCCCTCTT CGACAAGGTG
GGTAAATTCG CAGAATACCA GGTCGTCGGA AGGGACATCA CCGAGCAGAA GCGATCTTCA
GTTGCACTGG CAGAGAGCGA GTCCCGGCTC CGTTCATTCA TCGAATCGAC CCAGGAAGCG
GTCACCCTGG CGGATGAAGA GGGAAAACTG ATCGAGTGGA ATGCTGCAGC TGAACAGATT
ACCGGCATCC GAAAAGAAGA GGCTCTTGAG AGTTCCTTAT GGGACCTGGC CTTTCGGACA
GTCCCCCGTG AGTTCCGTAC TGAAGAACGC CGTGCAGGGA TTGAACAAAT GATTCATACT
TCGCTTGAGA CGGGCATTCC AATCTTTGAA GAAACCCGAA TTGTTGAAGT AGAGCGTCCC
GATGGCAGTC GGATCTACAC ACGACAGACC ATTTTTACGA TCAAGACCGA TCAAGGATTC
CGGATCGGTT CGACTGCGAT GGATATAACT AGGGAGAGAC TGGCGGAAGG TGCCTTAATA
GAGAGTGAAG AGAAGTACCG CGAGCTTGCA GAACTCCTCC CACAGATGAT CTTTGAAATA
GATCTGAATT TTAGGGTAAC CTATGCGAAC CGGTATGCGC TTACCGTCCT GGGATTGACC
GAACAGAATC TCAAAGACAA CATAAATGCC ATCTCCTTCT TCGATCCATC CCAGCATGCA
ATAATAGTGG ACAACATGCA AAAAGCCCTG AAAAGGATGA TCTTTGAACC ACGGGAATAT
ATCGCCCTGC GGAGGGATGG CAGCAGATTC CCGGTGATCA TCTATGCAGC CCCGGTTTAC
CAGGATCAGA CACTTACTGG ATTACGCGGG GTCATCGTCG ATATCTCTGA ACAGAGAAGA
ATTGAAGATG AACTCCGGGT GAATGAAAAT AAGTTCCGCT CGCTTATTGA GACCTCGCCG
GATATGATCT GGGAGATAGA CCGTGAATGG AAATTCCGGT ACATCAGTCC CAGGGTTTTC
ACGATCATGG GCTACACGCC GGAAGAGATC ATCGGACGAT CGGTAACCGA TCTGGTCCAA
AAAGACGCAA TACCGTTTGT TATGCGGGAG ATGGCTGGGT ATGTCTCTTC GGAGGGTTCT
TCTGCCCCCC TGGTAGTACC CAGTTTCGAC CGAAACGGGA GAGATCTGAT AATCGAGATC
CGAATGTCAT GGATTATGGA CGGTGAGGGC ACATTGACTG GATTCTATGG TGTAGCCCGT
GACATCACCG AGAGCAGGAA GGCCGAAGAG GCACTCCGAC AGAATTATGA CGAACTGAGC
AAAAAGGAAG ATGTGCTCCG TATCAGCGAG GAGAAGTACC GAACCCTTGT CGATCTCTCC
CTCGATGGTA TCGTTATCAT AGACTTTTCG GGTAACCTGC TCTTTGTAAA CAAAGCGGCC
GGCAGTATCA TCGGGGTTGC GGATTCTCAG GCGATGATCG AAAAGAGAAA CGTGATGGAT
TTTATTGTCC CCGAATCACA GGCCGACGTA CTTCGGGATA TCAGCCAGGT TGCCCGGGGT
ATCGATACGT ACCTTGTTCA CTATAAACTG ATCACGGAGA CAGAGGGGGA GGTCTGGGTT
GAGTGTATCG GTAAGAAGAT CCCGTTCGGG GATATTTCCG CAATGCTGGT CTCTGTCCGG
GATATAACGG AGAGTAAACG GGCTGAGGAT ATGCTGCGGG AATCAGAGAA TAAATTCGCA
ACGCTCTTCA AGTACAGTCC GGTCTCGCTC ACGCTCGTAT CCGCAGTCGA AGGGATCTTT
AGTGATGTCA ACGAGGCTTT CCTGAGAAGC ACGGGGTATT CCCGTGACGA AGTGGTTGGC
AGAAGGGCGG AGGATCTTGG GATCTTTGTC GACAGGAGTG AATACGAGCG CTTCGTTTCC
GTCCTTCGGG AGCGGGGGAC GGTCTTCGGC ATGGAATTGA AATGCCGGGT AAAATCTGGA
GAGATCCGGG ACTGCAGGTT CTCCTCAAGT ATTATCCTGA TGGGTGAAAA ACCATACATT
TTCTCGACTG TCGATGACAT CACTGAACAC AAAACTACCG AACTTGCAGT TCAGGCACTG
GTCCGGAGCA TGGTGGACTC AACCGGGCTT GACGCTCTGA AGAAGATCGC AGAGAATCTC
TGCTCCTGGT TGAGCACCGA TTGCGTCATG ATCGGAGAGA TCCAGCCCGA CGGAGAGACT
GTGAAGGTTT TATCCATGCT GCTCGACGGA GAGGAGGTTC ATGGCTTCTC CTACTCGCTC
AAAGGCACCC CCTGCAAGAA TGTCTGTGAG AGGGGGTTCT GCATCTATCC GGATGATACT
CTACGACTCT TCCCGGAGTG CAAGGATTTT GTCGACCTGA ATATCCGCGG GTACATCGGG
ACACCCCTGC GGAATTCCAG AGGTGATGTA TCCGGAATTC TCTGTGCGCT CTCCCGCAGT
CCACTCACAC CCTCCCCGAC CATTCAGAAG ATCATGGATA TTATTGCAGT GAAAGCCGCG
GCTGAGATCG AGCGTGTCCA GATAGACCGT ATGCTCAAGG AAAGCGAGCA TATGCTCAAA
GAGGCGATGG ACCTGACTAA CCTGGTTCAC TGGGAGTACG ATAGCAGAAC TGACCAATAT
ATCTTCAATG ACCGTTTTTA TGCCCAGTAC GGCACTTCAG CGGAGCAGGA AGGAGGATAC
CGGATGGCCC CGGAGCACTA CCGTCGGGAA TTTGTTCACC CAGATGATCG GGATGCAGTT
GCCGCGGCGT GTCTTAAGTC CCTGCCACCA GTCGATGGAG ATGTGCCTGA TGCTGATTTA
GAGGTCAAGA TTGAACACCG TATCGTCCGC AGGGATGGAG AAATTCGCCA TATCCTGGTA
CGAATTGGGT TTATGAAAGA TCCAAGAACA AAAATAACCC GATTATACGG CGCAAATCAG
GACATCACCG ATCGCAAGAG AGATGAGGAA ACGTTTCAGC AGGCGAACCG GAAACTCAAC
ATGCTCTCAG ACATCACCCG CCATGATATC AGGAATCAGC TCCTGAAACT GGATGGGTTT
GTTGAACTGT TACAGATGGA AGCACCTATC CCTTCCTTTG AGAATTTTCT TTCCCATATC
ACTGCTGCGA GCAACCAGAT CGCGAATCTG ATCCAGTTCA CTGGAGAATA CGAGAAGATC
GGTGTGCATG CCCCGACATG GCAGGATATC CGGACCTTGG TGGATAAAGC GGGGGTGGAT
GCGGTGGCTG AACTGGTCAC GCTCAAAAAT GATCTTCCTA CCAACATGGA TATGTACGCC
GATCCGATGA TTGTAAAGAT CTTCTTCAAT CTGGTGGATA ACGCCCTGCG TCATGGCGGT
ACTATCACAA CAATCCGGTT CTCTTTAGAG GAACGAGGTG AGGATCGGAT CATTGTATGC
GAAGATGACG GTGTTGGGGT AGCCACCGAT GAGAAGGAGA AGATTTTTGA TCTGGGGTAT
GGGAAGAACA CTGGTTTCGG CCTGGCCATC TCCCGGGAGA TTCTCGATAT TACCGGAATC
ACCATTAAAG AGACCGGAGA AGTCGGCACA GGGGCTCGAT TTGAGATTAT CGTACCGGCA
GGTCAGTACC GGTCGACATA A
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| Protein sequence | MADGVRVLYV DDEPALLEIG KIFLERSGEF HIGTFLSAQE ALASPSIQLW DVIVSDYQMP
GMDGIAFLKT VRKRFGDIPF ILFTGRGREE VVIDAINNGA DFYLQKGGDS RAQFAELSHK
IRQVVRRRDA ERELRKSEDR YRSIVNDQTD MIVRFTADGT VTFANEAFHQ YYHAILGFTE
IEGEKIHDLV QVGNYQNMDT ILRSLTPKTP ILHHIEYQVK DRDNTTYWQT WSVRALFDKV
GKFAEYQVVG RDITEQKRSS VALAESESRL RSFIESTQEA VTLADEEGKL IEWNAAAEQI
TGIRKEEALE SSLWDLAFRT VPREFRTEER RAGIEQMIHT SLETGIPIFE ETRIVEVERP
DGSRIYTRQT IFTIKTDQGF RIGSTAMDIT RERLAEGALI ESEEKYRELA ELLPQMIFEI
DLNFRVTYAN RYALTVLGLT EQNLKDNINA ISFFDPSQHA IIVDNMQKAL KRMIFEPREY
IALRRDGSRF PVIIYAAPVY QDQTLTGLRG VIVDISEQRR IEDELRVNEN KFRSLIETSP
DMIWEIDREW KFRYISPRVF TIMGYTPEEI IGRSVTDLVQ KDAIPFVMRE MAGYVSSEGS
SAPLVVPSFD RNGRDLIIEI RMSWIMDGEG TLTGFYGVAR DITESRKAEE ALRQNYDELS
KKEDVLRISE EKYRTLVDLS LDGIVIIDFS GNLLFVNKAA GSIIGVADSQ AMIEKRNVMD
FIVPESQADV LRDISQVARG IDTYLVHYKL ITETEGEVWV ECIGKKIPFG DISAMLVSVR
DITESKRAED MLRESENKFA TLFKYSPVSL TLVSAVEGIF SDVNEAFLRS TGYSRDEVVG
RRAEDLGIFV DRSEYERFVS VLRERGTVFG MELKCRVKSG EIRDCRFSSS IILMGEKPYI
FSTVDDITEH KTTELAVQAL VRSMVDSTGL DALKKIAENL CSWLSTDCVM IGEIQPDGET
VKVLSMLLDG EEVHGFSYSL KGTPCKNVCE RGFCIYPDDT LRLFPECKDF VDLNIRGYIG
TPLRNSRGDV SGILCALSRS PLTPSPTIQK IMDIIAVKAA AEIERVQIDR MLKESEHMLK
EAMDLTNLVH WEYDSRTDQY IFNDRFYAQY GTSAEQEGGY RMAPEHYRRE FVHPDDRDAV
AAACLKSLPP VDGDVPDADL EVKIEHRIVR RDGEIRHILV RIGFMKDPRT KITRLYGANQ
DITDRKRDEE TFQQANRKLN MLSDITRHDI RNQLLKLDGF VELLQMEAPI PSFENFLSHI
TAASNQIANL IQFTGEYEKI GVHAPTWQDI RTLVDKAGVD AVAELVTLKN DLPTNMDMYA
DPMIVKIFFN LVDNALRHGG TITTIRFSLE ERGEDRIIVC EDDGVGVATD EKEKIFDLGY
GKNTGFGLAI SREILDITGI TIKETGEVGT GARFEIIVPA GQYRST
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