Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1502 |
Symbol | |
ID | 5410876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1563889 |
End bp | 1566240 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640868737 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001404663 |
Protein GI | 154151045 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0445794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTCCTTA CGATATCAGT TCTCTATGTA GACGATGAGT CCGTACTCTG TGATATTGGC AAATTGTACC TTGAGCAGAC AAAAGAATTT ACCGTAACCA CCGCATCATC TGCCCGGGTT GCCCTTACCC GGTTAAAATC CAATGGAATC CAGGCCATTG TCTCCGATTA CCAGATGCCG GAAATGGATG GCATAGAATT TTTAAAACAG GTCCGGGCGA CTGACAAACA TATCCCGTTC ATTTTGTTTA CCGGTGAGGG CAGGGAAGAG ATCGCGATTG AGGCCTTTGA AAACGGTGCT GACGCGTATA TCCAGAAAGG GGGGGATCCA ATATCGCAGT TTGCCGATTT GACGCACAAA ATTAAGGTAA CCTTCGAACA CCGTCGGGCT GATGTCCAAC TCAATGTCCT CAACAGGCTC TATACGGTTC TTTCCGCGAC AAACAAGGCA ATCGTCCGTA TTCATGATAA AAAGGAACTT CTGAATGAGA TTTGCCGGAT TGCTGTGGAT TCCGGGGGTT TTAAGATGGC TTGGGTAGGG CTCCTCAATG CTGAAAACCA TCTCATCGAA CCCATTGCGA CATCTGGTTA TATTGACCAT TACCTTGATA CGATTTCCCT ATCGATCGAT GACACACCCA CCGGGAGAGG CCCGACCGGA ACTGCATTCC AAACGAGAAC TTTCAATGTC TGTAATGATA TAGAAAACGA TCCCACTATT GCATCGTGGC GCAAAGGGGC ACTTGAGCGG GGCTACCGTT CACTTGCAGC ATTCCCCTTT GCACTTGATA CCAGAAATGC CGGTGTGATC ACATTCTATG CTTCTGAACC GGGATTTTTT AATGACCAGA TCATCCGGCT CCTCAATGAA CAGGCAGAGG ACATCTCGTT TGCTTTTGTA ACTTTTGATC ATGAAGAACT ACGAATCACC GCTGAAAATA ATCTTAAGAA GTCAGAACTC CAGTACCGGC AGCAATTCCA GACGGCACCT GACGCGATCC TGATCCTTGA CGGCGATACC GGAGAAATTA TCGATGCGAA TACTTTCATT CTCGATATGA TTGGATACCC GAGGGATTAT TTCGTTGGCA GGCGTCTCTG GGAACTGGAG TTCCTCAAAG ACAAATCATT TGCAAAAAAC GCGTTTGAGA AACTGAAAAC TGACGGGTAT ATCAGGAATG ATGATCTGCC TCTGGAAATC AAACAAGGCC GGGCTATAAG GGTGGAGTTC ATCAGTAACG TCTACTTTGT AGGTGAAAAG AGGATTATCC AGTGCAATAT CAGGGATATC ACTGACAGGA AAGTGGTCCA GGATGAAATG CTGGCATCCG AAATCCGGTA CCGCCGCCTC TTTGAAACGG CACAGGATGC GATTCTGATC CTTGACGGCG ATACCGGAGA AATTATCGAT GCGAATAAAT TTATTCTCGA TATGCTGGGA TACCCGCTGG ATTATTTCGT TGGCAGGCAT CTTTGGGAAC TTGGGTTTCT CAAAGACAAA TCATTTGCCA AAAATGCGTT TGAGAAACTG AAAACTGATG GGTATATCCG GTATGAAGAT CTGCCCCTGG AAACAAAACA GGGCAATGCT ATCAGCGTGG AGTTTGTCAG CAATGTTTAC CTTGTGGGTA ATAAGAGGAT TATCCAGTGC AACATCCGGA ATGTCACTGA ACGGAAACGT GCTGAAGATG CACTTGCCCT TGCGAGCAGG AAACTGAAAC TATTATCAAG TATCACCCGC CATGATATCA GGAACCAGCT GATGGCGCTC TCCGGTTCCC TGGAACTTTC ACGGAAAACC GTTAAAGAAC CTGAAGGAGT TGCCAATATC AACCGGGCAT ACAAAGCAGC GGACACAATC CTGCGCCAGA TCGAATTTAC CAAAGAATAT GAGGATCTCG GAGTCAGGTC TCCCACATGG CAGCGGGCAT CCGACATTAT TCGTTCAGCT TCATTGCAGC TGGCAGCCGA TTCTATTACC TTTGAAATTC CCGAGGATCA CTTGGAAATA TATGCCGACC CACTCCTTGT CAAGGTGTTC TACAACCTGT TTGATAATGC CCGGCAACAC GGAGGCGCAG TTACCCGTAT CAGCATATCG GATCATCCCG TCGGCACCGG GCTTACGATC GTCATTGCGG ATAACGGGGT CGGAATACAA CAGGAAGACA AATCACATAT TTTCGAACGC GGTTTCGGGA AAAATACCGG ACTTGGCCTT TTTCTCTCCC GGGAGATTCT GTCAATTACC GGGATTTCCA TAAGCGAGAC CGGTGTTCCG GGCAAGGGTG CACGATTTGA GATCGCGGTA CCGGAAGGTA CGTTTCGGTT TGCGGGTCCG ATGAAGATGT AA
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Protein sequence | MVLTISVLYV DDESVLCDIG KLYLEQTKEF TVTTASSARV ALTRLKSNGI QAIVSDYQMP EMDGIEFLKQ VRATDKHIPF ILFTGEGREE IAIEAFENGA DAYIQKGGDP ISQFADLTHK IKVTFEHRRA DVQLNVLNRL YTVLSATNKA IVRIHDKKEL LNEICRIAVD SGGFKMAWVG LLNAENHLIE PIATSGYIDH YLDTISLSID DTPTGRGPTG TAFQTRTFNV CNDIENDPTI ASWRKGALER GYRSLAAFPF ALDTRNAGVI TFYASEPGFF NDQIIRLLNE QAEDISFAFV TFDHEELRIT AENNLKKSEL QYRQQFQTAP DAILILDGDT GEIIDANTFI LDMIGYPRDY FVGRRLWELE FLKDKSFAKN AFEKLKTDGY IRNDDLPLEI KQGRAIRVEF ISNVYFVGEK RIIQCNIRDI TDRKVVQDEM LASEIRYRRL FETAQDAILI LDGDTGEIID ANKFILDMLG YPLDYFVGRH LWELGFLKDK SFAKNAFEKL KTDGYIRYED LPLETKQGNA ISVEFVSNVY LVGNKRIIQC NIRNVTERKR AEDALALASR KLKLLSSITR HDIRNQLMAL SGSLELSRKT VKEPEGVANI NRAYKAADTI LRQIEFTKEY EDLGVRSPTW QRASDIIRSA SLQLAADSIT FEIPEDHLEI YADPLLVKVF YNLFDNARQH GGAVTRISIS DHPVGTGLTI VIADNGVGIQ QEDKSHIFER GFGKNTGLGL FLSREILSIT GISISETGVP GKGARFEIAV PEGTFRFAGP MKM
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