| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0338 |
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| Symbol | |
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| ID | 5409982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 327706 |
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| End bp | 329667 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640867553 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001403502 |
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| Protein GI | 154149884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.84298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACCG TCCTTTATGT CGATGATGAA CCCGATCTGC TTGAGATAAG CAAACTTTTC
CTTGAGCAGA GCGGGCAGTT TTCCGTTGAC ATTCTGCCTT CTGCTCCCGA GGCGCTTGCC
GCAATGAAGG TAAAGACCTA TGATGCCATT GTCTCGGATT ACCAGATGCC CGGGATGGAC
GGCATCGATT TTTTAAAAAA TGTCCGGGCT TTGGGGGATA CTATCCCGTT TATCCTTTTT
ACCGGGAGGG GGCGGGAAGA GGTTGTCATC CAGGCCTTAA ATGAAGGGGC CGATTTCTAT
CTCCAGAAAG GCGGGGATCC GACAGCGCAG TTTGCGGAAC TGACCCACAA GGTTCTCCTT
GCGATAGAAC ATCGCAGTAA TGCTGAAAAA ATACAGTCCT TAAACCGGCT GTACCTGGTT
ATTTCCGCGA TTGACCGGGC AATTGTCCAG CTTCGCACAA AGAGTGAATT CTTATCGGAG
GTCTGCAGGA TCCTGGTGGA AACCGGAGGA TTCCGCATGG CCTGGATCGG CATTCCTGAT
CCCGGAGAGG GGATAATCAG ACCGGTAGCC TCCGCCGGGC AGGTTGAAGG TTACCTTGAG
ATCGTCAGGG TAGCCCTGGA TGATTCAACA CGCGGATGCG GGCCCACAGG GAAAGCGTAC
CGGGAAGGGA AAAATTGTAT TTGTAACGAT ATTGTAAGCG ATCCCTGCAT GGAACCATGG
CGGAAGGAAG CCCTGAAACG GGGTTACAAC ACCTGTGCTG CATTCCCGTT CGGCCGTGGA
TCCAACAACC CCGGGGTCCT GGTGCTCTAT GCGTCAGAAC TCGGGTTTTT CAACGACCAG
ATCATCTCCC TGACAAACGA TCTGGTTGCC GATATCGCCT TTGCGCTCGC AACGCTGGAT
CACCAGAAAG AGCGGGAATC TGCGATTGCT GCCCTCAGGG AGAGTGAAGA AAAATACCGG
CTTGTTGTTG AAGACAGCAG GGATGCGATC TACATCCACC AGTCCGATCG GCTCCTCTTT
GTAAACCGGC AGGCCTCCGT TCTTACCGGG TACTCCCATG AAGAACTCTT AACCATCCGG
CTCTGGGACC TCGTGCACCC CGATGACCGG GAGATCCTTA TCCGGAATAA CCGGGACCGG
TTGGCCGGCA ATCCGCCACC CCATGAGTTT ACCGCCCGGC TCCTGACCAA AGACGGCACG
TCGCGGACCT GTGAATTTGT TGTGGACATG GTCATGTACC AGGGCTCGCC TGCAATCATG
GGGATTGCAC GCGATATAAC TGAACGCAGG AAGACTGAAG AGGCGCTCGC TTCGGCAAAC
ATGAAACTCA AACTTCTTTC GGGGATTACC CGTCATGATA TCAGGAACCA GCTCACTATC
CTTGAAGGCC GCCTGGCATT CATGAAAAAG AAGGAGCCCG ACTCTCCCTT CCTTGAACAT
TTTGAGAAGA TGTCTGCTGC TGCCCGGCGT ATTGCCTCGA TCATCCAGTT CACCAAGGAA
TACGAGGATA TCGGCATCCG TGCCCCGGCC TGGCAGGACT GCCGCACCCT TGTCGATACT
GCCGCACAAC AGGTCCATTC AGGGCAGGTC CCGGTAAAAA ACGATCTCCC CCCCGGGACG
GAGGTGTTTG CCGACCCGCT CATTGTCAGG GTGTTTTACA ACTTGATGGA TAATGCAGCC
CGGTACGGGG GAAAGATTAC CTTTATCCGG TTCTCTCTTG AGGGATCCGG TAACGATTAC
CGGATCGTGT GCGAAGACGA TGGCGAAGGA ATACCGGCAG AAGATAAAGA AAAAATCTTC
CTGCAGGGTT TTGGCAAAAA TACCGGCCTT GGCCTGTTTT TGTCTGCCGC CATTCTCCAT
ATTACCGGGA TTACGATCCG CGAGACCGGC GAGCCGGGGA AAGGGGCACG TTTTGAGATC
ATCGTGCCAA AAGGGGCATA CCGGTTCAGC GGCGGGGAGT AG
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| Protein sequence | MYTVLYVDDE PDLLEISKLF LEQSGQFSVD ILPSAPEALA AMKVKTYDAI VSDYQMPGMD
GIDFLKNVRA LGDTIPFILF TGRGREEVVI QALNEGADFY LQKGGDPTAQ FAELTHKVLL
AIEHRSNAEK IQSLNRLYLV ISAIDRAIVQ LRTKSEFLSE VCRILVETGG FRMAWIGIPD
PGEGIIRPVA SAGQVEGYLE IVRVALDDST RGCGPTGKAY REGKNCICND IVSDPCMEPW
RKEALKRGYN TCAAFPFGRG SNNPGVLVLY ASELGFFNDQ IISLTNDLVA DIAFALATLD
HQKERESAIA ALRESEEKYR LVVEDSRDAI YIHQSDRLLF VNRQASVLTG YSHEELLTIR
LWDLVHPDDR EILIRNNRDR LAGNPPPHEF TARLLTKDGT SRTCEFVVDM VMYQGSPAIM
GIARDITERR KTEEALASAN MKLKLLSGIT RHDIRNQLTI LEGRLAFMKK KEPDSPFLEH
FEKMSAAARR IASIIQFTKE YEDIGIRAPA WQDCRTLVDT AAQQVHSGQV PVKNDLPPGT
EVFADPLIVR VFYNLMDNAA RYGGKITFIR FSLEGSGNDY RIVCEDDGEG IPAEDKEKIF
LQGFGKNTGL GLFLSAAILH ITGITIRETG EPGKGARFEI IVPKGAYRFS GGE
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