| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1514 |
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| Symbol | |
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| ID | 7271059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1559706 |
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| End bp | 1563467 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643570129 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002466551 |
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| Protein GI | 219852119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.841858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0475592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCATG TTCTCTATGT TGATGACGAA CCGGCCCTTC TCGAACTTGG AAAAATATTT
CTTGAGATGT CGGGCCTCAT CACCGTAGAA ACAGCATTAT CCGCAGAACA GGGAATTCAG
GCCTTAAAAG ATACTGCTAT CGACTGTATC ATATCAGACT ACCAGATGCC GGAGATAGAC
GGTCTCAAGT TTCTCAAGTT CTTAAGGAAA GAGAAGAACA GGATTCCGTT CGTCCTCTTC
ACTGGCCGTG GGCGTGAGGA GGTGGTCATC GAAGCGGTGA ACAATGGTGT TGATTACTAC
CTCCAGAAGG GTGGCGATCC CAAGTCACAG TTCGTTGAGC TGGAACACCA GATCAAACAC
ACAATCGAAC GTCGACGCAC AGAAATTGAA CTTCAGGAAT CCCAACAGCG GATGACGGAT
ATCATCAACC ACCTGCCAGA CGCCACCTTA GCGATCAATC TGGATGGAAC GGTGATCGCA
TGGAATTGGG CGATGGAGGA GATGACCGGG GTACCGAAAG AACAGATGCT GGGAACCGGG
GATTATTCCT ATGCTCTTCC GTTTTACGGA ACAAGGAGAC CTATCCTCCT CGACCTCGTT
TTACAGGATG ATGAAGAGAT CTGGAAACAT TATCCTCATA TCATCAGAAA AGAGAGGAAA
CTGATCTCCG AAATCTATAT TCCCTTCCTC GCTGGTGGAA AAGGTGCCTA TCTCTGGTTT
ATCGCATCCC CGCTCTATGA CACGCAGGGC ACCGTCACCG GGGCAATCGA ATCCATCCGG
GATATCACCG ACAAAAAGAA TATCAAGACT GAACTGAGGG ACGCATCCGA ACAGATCGCT
GCAGATGAAG AAGAACTGCG TGAACAGTAT GATGAACTGA AGAAGAGCGA AGACGCCCTC
CGCGAAAGCC GGGCGAAGCT GGAAGCTGCG CTGGCCAGTA TGACGGACGC GATCTTCATC
TCTGATACAA AAGGACGGTT CATCGATTTC AACGATGCCT TCGCCACCTT CCATAGGTTC
CGGAACAAGG ACGAATGTGC CAGAACACTC GCCGAATATC CGGATTTTTT CGAGGTATTC
ATGCCAGACG GGGAACTGGC GCCGCTGGAT ATGTGGGCGG TGCCGCGTGC CCTTCGTGGC
GAAACAGTCA CGAATGCAGA ATATACCCTC CGGCGCAAGG ACACGGGTGA AACCTGGGTC
GGGAGTTACA GTTTCAGCCC AATTCTCGAC AACGACGGTG CGATCGTCGG CTCCGTGGTG
TTGGGTCGGG ACATCACCGA GAAAAAGCGG GCAGAGGAGG CACTCCGCAC GAGCGAGGAG
GATCACCGGC GATTGTTCGA GACGATGGTC CAGGGGGTCG TGTACCTGGA TGCCGAAGGT
ACAATCACTT CGATGAACCC GGCTGCCGAA CGGATTCTCG GGAAGACCCT GGACATGTTC
CTTGGAGAGA CCTCTGATAC CGTGGAACTC GACTTGATCC GCGAGGACGG TTCGCCGTTC
CCGGGCAGGG AACATCCATC GATGGTGGCG CTCAGCACCG GTCGGGAAGT CCGGGACGTG
GTGATGGGCG TGTTCATCCC AGACGAGGAG CGATATCGCT GGATCACCAT CAATGCCATG
CCCCTCTTCC GGCCAGGTAA GGAAAAACCG CACCAGGTCT ATACGATCTT CGATGATATC
ACCGAACGCA AACGGGCTGA GGAAGAACTC CTGAGAAAAA CCACCGATCT CGAAGCGAGT
TATGAAGAGA TAACGGCGAC CGAAGAGGAG CTCCGGGAGA ATTATGAGAA ACTGACAGGG
AGTCAGCAGG AACTGAAGAT CAGTGAAGAG CGGTATCGCA CCCTCTTTGA GAATATGCTG
GAAGGAGTTG CCTACTGCCA GATGTTCTAT GACAGCGATG GACGACCGGA TGATTTCATC
TACTTCAGTG TCAATGCTGC ATTCGATCGG ATCATCGGAA CAACAACTGT TGTCAATAGA
CGGGTCACTG AGGTTTTTCC CGGCATTAAG GAAGCATATC CGGAATTGTT CGAGATCTGT
GGGAGAGTTG CCCGGACGGC AAAACCCGAA GCATTCGATA TCGACTTCAA ACCTTCCGGC
AAATGGCTGC ACCTGTCGGT ATATTCTCCG GCAAAAGAGT ATTTTGTCAC CGTATTCGAG
GATATCACCG AACGCAAACG AGCTGAACGG GTTTCATCCC AGATAAACAG GATCTATCAG
ATCGCAAACC AGGCGGGTTC CCTACACGAG ATGCTTCAGA GGTATGTGGA GGAGTTCAGG
GTATTCTCTC ACTGTGAGGC GATCGGATTC CGGCTTCTGG ATGCAGAGGG CAACATCCCG
TACCAGGCAT ACTGCGGATT CCCCGAGTCC TTTTACGAGA GAGAGACACC GCTCAATATT
CTATCTGATG AATGCATGTG CATTTATGTC ATAACCGGAG CGATCAAACC CGACCTGCCG
GTTGCAACAC CAGGGGGGTC CTTCTACTGC AATGCCACCA GCACATTCCT AGCCAGCATC
TCTGACGAGG AGAGAGGGCT CACCCGCAAT GTCTGCAACG AGATGGGATA CGAGTCCGTC
GCTCTCATTC CGATCCGGAC CTCACAGGGG ATCATCGGGC TCATCCAGTT CAACGATCAC
CGGGAGAATA TGGTTCCCCT CGAACTGGTC CAGATCATGG AAGAGGTCGC CCTGCCGCTC
GGAGAGGTGA TCCGCAGGAT GCAGGCCAAG GAATCACTGA TTGAGAGTGA AGAAAAATAC
CGCATACTTG TGGAAAATAT TCCTGAAAAG ATCTTCATCA AGAATGCTGC TCTGACCTAT
GTATCCTGTA ATGAACAGTA CGCCCGCGAT CTCGGCATTG TTCCTGGAGA TATTGCAGGA
AAGTCGGATT TTGATTTTTT CCCCCCTGAA CTGGCGGAGA AGTATCGGGC GGACGACCTG
GCTATTATGG ATTCCGGAGA GACCAGGGAG CTAGAAGAAC AGTATGTCAC GGAAGGAAAA
GAGTTCTGGA TCTCCACAAT AAAAACTCCT CTCCGAAATG ATACGGGAAC GATCTCCGGA
ATTCTCGGCA TTTTCCATGA CATTTCAGAA CGCAAGAATC AGGAGCTGGC CCTGCGAACC
GCAAACCAGA AACTGAACCT GATGAATATT GTCGCATGGC ATGATATCTA CAACAAGGTC
ACCGGGCTGC GGGGATATGT CGAACTGAGC AAGGCACTTA TCACCGATGA GAAGGCGCGG
GAATTTCTCG AACGCGAGGA TACCATTCTC CAGGTGATCC ATCAGCAGAT CTCGTACACC
AAGGAATACC AGGAGATGGG CAAGCAACAC CCCCGCTGGT ACAGTCTGAG AGAACTCCTG
GACAACGTCC GCATGACAGG GGTGGCAGGA TCTATCCGCA TCATAAACGA TGCAGAGAAT
CTGGAACTTT ACGCTGACCC GGTCATCGAG AAAGTGTTCT GGCACCTGAT CGATAACTCG
GTTAAACACG GCGAAAAGGT AACGGAGATC CGGATTACCG CCCGGCAATC AGAGATCGGC
TGTACGCTGG TATACCGGGA TGATGGGGTC GGGATTCCGG AGGAGAAGAG AAGAGACCTG
TTCACCAAGA GTTATGGGAC AGAGACCGGA TTTTTTCTCT TCTTTGTCCA CGATCTTCTT
GAGATTTCCG GTATGACGAT CGCAGAGACC GGGGAGCCGG GGAACGGGGT CAGGTTCGAG
ATCACGATTC CGAAGGGATT GTACCGGTTC ACCGACAGGT GA
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| Protein sequence | MYHVLYVDDE PALLELGKIF LEMSGLITVE TALSAEQGIQ ALKDTAIDCI ISDYQMPEID
GLKFLKFLRK EKNRIPFVLF TGRGREEVVI EAVNNGVDYY LQKGGDPKSQ FVELEHQIKH
TIERRRTEIE LQESQQRMTD IINHLPDATL AINLDGTVIA WNWAMEEMTG VPKEQMLGTG
DYSYALPFYG TRRPILLDLV LQDDEEIWKH YPHIIRKERK LISEIYIPFL AGGKGAYLWF
IASPLYDTQG TVTGAIESIR DITDKKNIKT ELRDASEQIA ADEEELREQY DELKKSEDAL
RESRAKLEAA LASMTDAIFI SDTKGRFIDF NDAFATFHRF RNKDECARTL AEYPDFFEVF
MPDGELAPLD MWAVPRALRG ETVTNAEYTL RRKDTGETWV GSYSFSPILD NDGAIVGSVV
LGRDITEKKR AEEALRTSEE DHRRLFETMV QGVVYLDAEG TITSMNPAAE RILGKTLDMF
LGETSDTVEL DLIREDGSPF PGREHPSMVA LSTGREVRDV VMGVFIPDEE RYRWITINAM
PLFRPGKEKP HQVYTIFDDI TERKRAEEEL LRKTTDLEAS YEEITATEEE LRENYEKLTG
SQQELKISEE RYRTLFENML EGVAYCQMFY DSDGRPDDFI YFSVNAAFDR IIGTTTVVNR
RVTEVFPGIK EAYPELFEIC GRVARTAKPE AFDIDFKPSG KWLHLSVYSP AKEYFVTVFE
DITERKRAER VSSQINRIYQ IANQAGSLHE MLQRYVEEFR VFSHCEAIGF RLLDAEGNIP
YQAYCGFPES FYERETPLNI LSDECMCIYV ITGAIKPDLP VATPGGSFYC NATSTFLASI
SDEERGLTRN VCNEMGYESV ALIPIRTSQG IIGLIQFNDH RENMVPLELV QIMEEVALPL
GEVIRRMQAK ESLIESEEKY RILVENIPEK IFIKNAALTY VSCNEQYARD LGIVPGDIAG
KSDFDFFPPE LAEKYRADDL AIMDSGETRE LEEQYVTEGK EFWISTIKTP LRNDTGTISG
ILGIFHDISE RKNQELALRT ANQKLNLMNI VAWHDIYNKV TGLRGYVELS KALITDEKAR
EFLEREDTIL QVIHQQISYT KEYQEMGKQH PRWYSLRELL DNVRMTGVAG SIRIINDAEN
LELYADPVIE KVFWHLIDNS VKHGEKVTEI RITARQSEIG CTLVYRDDGV GIPEEKRRDL
FTKSYGTETG FFLFFVHDLL EISGMTIAET GEPGNGVRFE ITIPKGLYRF TDR
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