| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2464 |
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| Symbol | |
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| ID | 7271633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2602195 |
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| End bp | 2604633 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643571062 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002467463 |
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| Protein GI | 219853031 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTTCTA CGATATCGGT TCTTTATGTA GACGATGAGT CCGTCCTCCT CGACATTGGA
AAACTGTACC TCGAGCGGAC GACTGATTTT TCCGTGATCA CGACATCATC TGCTCGGGCT
GCCCTCGACC TGATGAAATC TAATGATATC CAGGCCATTG TCTCTGATTA TCAGATGCCG
GGGATGGATG GTATTGAGTT ATTAAAAGCG GTCAGGGCGA TGAATAAATC CATCCCGTTC
ATCCTCTTCA CCGGCAGGGG CAGGGAAGAG ATCGCTATTC AGGCTTTTGA AAACGGTGCG
GATTTTTATC TCCAGAAAGG TGGGGCGCCC AAACCACAGT TTGCCGAACT TTCACATAAG
ATTAAGGCAG CAGTCAATCA TCGCCGGGCT GATCTCCAGG TCATCGCCCT CCAGCGGCTC
TATACGGTGC TCAGTGCGAC AAACCACGCA ATCGTTCGTA TCCATGATAA AAAGGAACTG
TTGAACGAGA TCTGCCGGAT CGTTGTCGAT GACGGCGGTT TTACGATGGC CTGGGCAGGA
TTTTTCGATG GTGAAAAGCA CCTCATCGAA CCCATTGCAC AGGCTGGATA TGTCGAAGGT
TTTCTCGATC AGATGTTGAT ATCGACCGAT GATATACCCC TTGGTCAAGG TCCGACCGGA
ACTGCATTCC GCAAGGGAAT GTTCACGGTC TGTAATGATA TCGAAAGCGA TCCGAAGATG
GCTCTGTGGC GCAAAGGAGC GCTTGAGCGG GGTTATCGTT CGCTCGCTGC CTTCCCCTTC
GCTCTAGATA CCAGAAATGC CGGTGTAATC TCATTTTACG CTTCGGAATC TGGTTTTTTT
ACCGATCAGA TCATCGAGCT TCTTCATGAA CAATCCGGAG ATATCTCGTT TGCTCTTGGA
ATTCTGGATC ATGAAGAGCA ACGAATAGCG GCCATAAACA ATCTTAAAAA ATCAGAGATC
CAGTACCGCC GTCTCTTTGA GACGGCACAG GATGCGATCC TGATCCTTGA AGGTGATACT
GGTAAAATTA TCGATGCAAA TGCATTCATT CTCGATATGC TCGGATACCC GCTTGAGTAC
TGTATCGGCA AAAATCTCTG GGAACTCGGG TTCATCAGGG ACAAATCCAT CGCTCAGCAT
GCATTCACTG AACTGAAGAC GAACGGTTAT ATCCGGTACG AGGATCTTCC TCTGGAGACC
AAGGACGGGC GAAGTATTAC TGTCGATTTC ATCAGCCATG TCTACAATGT AGGCGATAAG
AAGATCTTTC AGTGCAACAT CCGGGATATC ACCAGCAGGA AAGTGTTTCA GGATGCATTG
AAGACATCAG AGACCCGGTA CCGTCGCCTC TTCGAAACGG CACAGGACGC GATCCTGATC
CTTGACGGTG ATGCCGGTGA AATTATCGAT GCAAATGCAT TCATTCTCGA TATGCTGGGG
TACCCGCTTG AGTACTGTAT CGGCAAACAT CTCTGGGAAC TCGGGTTCAT CAAGGACAAA
TCCATCGCTC AGCACGCATT CGCTGAACTG AAAACAAACG GTCGCATCCG ATATGAAGAC
CTCCCTCTGG AGACAAAGGA CGGGCGGAGT ATTGATGTCG ATTTCATTGG TCATGTCTAC
TATGTTGGTG ATAAGAAGAT CTTCCAGTGC AACATCCGGG ATATCACCAG CAGGAAAGTG
TTTCAGGATG CATTGAAGAT ATCTGAAATC CGGTACCGCC GTCTCTTCGA AACAGCACAG
GATGCGATCC TGATCCTTGA CGGTGATACT GGTGAAATTA TTGATGCAAA TGGATTCATT
CTCGATATGC TCGGGTACCC GCTTGAGTAC TGTATCGGTA AACATCTCTG GGAACTCGGG
TTCATCAAGG ACAAATTCAT CGCTCAGCAT GCATTCGCTG AACTGAAAAC GAAGGGTTAT
ATTCGGTACG AGGATCTGCC CCTGGAGACA AAGGACGGTC GGAGTATTGA CGTTGATTTC
ATCAGTCATG TCTACCTTGC GGGTGACAAG AAGATCTTCC AGTGCAACAT CCGGGATATT
ACCGCACGAA GACATGTGAG AGATGCACTT GTGGAGAGTG AAGCACAGTA CCGGACGCTC
TTTGAATATA CAAGCGATGC CGTCTTCATC ATGAACAGCA CCGTCATTCT GGACTGCAAC
CACAATACAG AGGTGATATC TGGCTGTTCC CGAGATCAGA TCCTCGGCAG TTCTCCTGTG
GCATTGTCCC CGAAATGCCA GCCAGATGGA AGGCTTTCAA CTGAGAAAGC AAAAGAGAAG
ATTGATTCCG CCTTCTCTGG AGAGCCCCAG TTTTTTGAGT GGGTCCAGAC CCGTTATGAT
CACACCACCT TCAATGTCGA TGTGATTCTC AACCGCATCG TGCTCAAGGG TGATTACTGC
CTGCAAGCCA TCGTTCGGGA GGTTCCCGAT CGCAGGTAG
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| Protein sequence | MVSTISVLYV DDESVLLDIG KLYLERTTDF SVITTSSARA ALDLMKSNDI QAIVSDYQMP
GMDGIELLKA VRAMNKSIPF ILFTGRGREE IAIQAFENGA DFYLQKGGAP KPQFAELSHK
IKAAVNHRRA DLQVIALQRL YTVLSATNHA IVRIHDKKEL LNEICRIVVD DGGFTMAWAG
FFDGEKHLIE PIAQAGYVEG FLDQMLISTD DIPLGQGPTG TAFRKGMFTV CNDIESDPKM
ALWRKGALER GYRSLAAFPF ALDTRNAGVI SFYASESGFF TDQIIELLHE QSGDISFALG
ILDHEEQRIA AINNLKKSEI QYRRLFETAQ DAILILEGDT GKIIDANAFI LDMLGYPLEY
CIGKNLWELG FIRDKSIAQH AFTELKTNGY IRYEDLPLET KDGRSITVDF ISHVYNVGDK
KIFQCNIRDI TSRKVFQDAL KTSETRYRRL FETAQDAILI LDGDAGEIID ANAFILDMLG
YPLEYCIGKH LWELGFIKDK SIAQHAFAEL KTNGRIRYED LPLETKDGRS IDVDFIGHVY
YVGDKKIFQC NIRDITSRKV FQDALKISEI RYRRLFETAQ DAILILDGDT GEIIDANGFI
LDMLGYPLEY CIGKHLWELG FIKDKFIAQH AFAELKTKGY IRYEDLPLET KDGRSIDVDF
ISHVYLAGDK KIFQCNIRDI TARRHVRDAL VESEAQYRTL FEYTSDAVFI MNSTVILDCN
HNTEVISGCS RDQILGSSPV ALSPKCQPDG RLSTEKAKEK IDSAFSGEPQ FFEWVQTRYD
HTTFNVDVIL NRIVLKGDYC LQAIVREVPD RR
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