| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2385 |
|---|
| Symbol | |
|---|
| ID | 3923283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2635702 |
|---|
| End bp | 2637864 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637897995 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_503806 |
|---|
| Protein GI | 88603628 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.788418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCT CCATCCTCTA TGTTGATGAC GATACTGATT ACCACATCAT AGTCTCCAAA
TTTTTCAAGA GAGAAGCCGA TCTTTCTGTT ACGTTCTGTT CTACCGCTCA TGCCGCTCTT
GACCTCCTTG AGCATGAGTT ATTTGATGTC ATTGTCTCTG ATTATCTGAT GCCGGTGATG
GACGGAATTT CACTTTTGAA GGAAGTGAGG AAGAGATATG GAAGACTTCC ATTCATTCTC
TTTACCGGGA GGGGCAGGGA AGAGGTGGTC ATTCAGGCGA TCAATAATGG AGTGGATTAC
TATCTGCAAA AGGGTGGGGA TTTTCTCGGC CAGTTCACCG ATCTGATTCA CAAGATACGA
TCTCTGTATG AGAAGAATGC GATAGAAAAT CTGGCACGGG AGAATGAAAG ACGGTTTCGA
AAGACCCTTG ACCGAATCCA TATGGTGGCT TTTCACCTGG ATGAAAACGG GATAGTTCAA
TATTGCAATG ACTATTTGCT CTCTCTGACC GGGTGGACCA GGGATGAATT TCTCCACAAG
GACTTCTTTG AGATGGCGGT ACCTCCCGAC CTTCGTGAAA TGAAAAAACG CCTGTATAAG
GAGGCTGTTT CAAAGGAATC CATCTCCCAG CATGAAGAGA TGAAAATCCT CCTCAGGTCA
GGAGAGATCC GGGATCTTGA TATCATCAAT ACTGACATGC GCGATGAGAA GGGGCGGTTC
CTTGGGTACA TGTGTATTGG TGAAGATGTT ACTGAGAAGA AGAGGGTGCG AAATGAGGCT
CTTTCCTGGA AACAGCGGTA TGAGAAGTTA ACTGCCAGGA CCGGACAGAT TGCGTATGAA
TATGATATTG ATAATGATAT CCTTCTCATG GATGAGAGTG CCGGCCATGT GATCGGGTAT
GCTCCTGAGG AACTCAGAAA TGGAAAGGAA CTCTGGATGA ATATCATTCA TCCGGATGAT
TACCAGAATG TCTTTGATAC ATTCAGCAGG GCAGTTTCTG AATCAGAGGA GTTTGATATC
TCATATCGGA TAAAGCATAA AAACGGGAGG TATATCTGGA TTCAGATCCA GGGGTTCTTT
GACCCTGCCC CTGATACGCG ATCGAAGATC ATAGGGATTA TTTCTGATAT TACCAGGGAA
AAGGAAGCGG AGATAGCACT CTTAAAAAGT GAAGAGAAAT TTAAATTATA CCTTGAAAAA
GCTCCATATC TTGTTGTAAT ATTTGATCGG TATGGCCGCA TATCCTACAC AAACCCGGCA
GGAGAGCAGC TGACCGGGTA CTCATCTGCA GAGATCACTC AGATGAGTGT ATTTGATCTG
ATATTGCCTG AAGAGGTGCC AGAAACCAGG ATCGTTTTTG AAACTCTCTT CGAAAGGGGA
TATGTTCATA AAAATGTAAC CCTGATCGGA AAGAACAAAA ATATTGTATA TGTCGAAGCA
GATGCGATTC TGCTTGAAGG GGGGGAGGTC CTTGGATTCT GCCTGGATAT CACAGAGAAC
GTAGTTAATG AGAAGAAAAT ATCAGAAATA TCCCGAAAAC TCCGGCTTCT TCAGTCAATA
ACCCGTCATG ATGTAATGAA TGTGGTAACA TCCATCCGGG GATACATGCT TCTGCTGAAT
GATTTTGAAG ATCCTGCTGA GAGAGAACGG ATTTTTGATA CCATTATCGG GTTTCTGAAA
AGGATTGAGA ATCTGGTAAA CTTTTCACGA GAATATGAGC AGATTGGGGT CCATTCTCCA
ACCTGGCAGA ATGTTGCCCA TCTTATCGAA CACATTCATA CCTCCAATAT CCCGGTGAGG
TGTGCGATCC CACAGGATCT GGCCTTGTAT GCAGATCCCA TGCTGGATCA TGTCTTTGCC
AACCTCTATC ATAACTCGGT CAATCATGGG GGTGATGTGA CTGAGATATC CTGTTACATG
GGAATCGATG AGCAGGGGAT CAGGATCATA TGGGAGGATA ATGGGGTGGG GATTCCTTCA
GAGGAAAAAG ATCGGATATT TATCCTTGGG TACGGGAAGA ACTCGGGATT TGGTCTCTAC
TTCATTTCAG AGGTCCTGGC AATGACCGGG ATTAGCATCA CCGAGACCGG TGAGTATGGA
AAAGGGGCAC GGTTTGAGAT CTCTGTGCCG AGAGCGATGT ATCGGTTTGA ATCTGAACAA
TAA
|
|---|
| Protein sequence | MTISILYVDD DTDYHIIVSK FFKREADLSV TFCSTAHAAL DLLEHELFDV IVSDYLMPVM
DGISLLKEVR KRYGRLPFIL FTGRGREEVV IQAINNGVDY YLQKGGDFLG QFTDLIHKIR
SLYEKNAIEN LARENERRFR KTLDRIHMVA FHLDENGIVQ YCNDYLLSLT GWTRDEFLHK
DFFEMAVPPD LREMKKRLYK EAVSKESISQ HEEMKILLRS GEIRDLDIIN TDMRDEKGRF
LGYMCIGEDV TEKKRVRNEA LSWKQRYEKL TARTGQIAYE YDIDNDILLM DESAGHVIGY
APEELRNGKE LWMNIIHPDD YQNVFDTFSR AVSESEEFDI SYRIKHKNGR YIWIQIQGFF
DPAPDTRSKI IGIISDITRE KEAEIALLKS EEKFKLYLEK APYLVVIFDR YGRISYTNPA
GEQLTGYSSA EITQMSVFDL ILPEEVPETR IVFETLFERG YVHKNVTLIG KNKNIVYVEA
DAILLEGGEV LGFCLDITEN VVNEKKISEI SRKLRLLQSI TRHDVMNVVT SIRGYMLLLN
DFEDPAERER IFDTIIGFLK RIENLVNFSR EYEQIGVHSP TWQNVAHLIE HIHTSNIPVR
CAIPQDLALY ADPMLDHVFA NLYHNSVNHG GDVTEISCYM GIDEQGIRII WEDNGVGIPS
EEKDRIFILG YGKNSGFGLY FISEVLAMTG ISITETGEYG KGARFEISVP RAMYRFESEQ
|
|---|
| |