| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2477 |
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| Symbol | |
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| ID | 7271646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2615754 |
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| End bp | 2620073 |
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| Gene Length | 4320 bp |
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| Protein Length | 1439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643571075 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002467476 |
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| Protein GI | 219853044 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.131363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.44536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC AGGATTTGAA TATGACAGAT TCAGGATCCG AGTCCACCAA AAACAAGATC
TCCATCCTCT ATGTTGATGA CGAGCAGGAT CTCCTCACGG TAACCAAGTT CTTCCTAGAG
CGTGCAGGTG AGTTCAGGGT CGACACCATG ACATCGGCCC AGGAAGCACT GAACTCCCCT
CTTATTCAAT CATACGACGT CATCATCTCT GATTATCAGA TGCCGGGGAT GGATGGGATC
GCTTTTTTAA AAGCCGTCAG GGAACGGTTC GGCACCATTG CCTTCATTCT TTTCACCGGG
CGAGGTCGTG AAGAGGTTGT CATCGATGCG ATCAACAACG GAGCCGATTT CTATCTCCAG
AAAGGCGGAG AGCCAAAGAG TCAGTTTGCC GAGCTCACCC ATCAAATCCG CCGAGCTGTC
CAGCAGAGAA GGGCTGAAAT CAGTATCCGG GATCTTGAAC GCAGAGAAGC CGATATCATC
GACTTCCTGC CGGATGCAAC CTTTGCAATC GACCGATTTG GGACAATTAT CGCATGGAAC
CGTGCCATGG AAGAGATGAC CGGTGTACCG ACCAGGGATA TACTGGGAAA GGGAGATTAT
GAGTACTCAA TCCCGTTCTA CGGGCAACGG CAGCCGAGCC TGATCGATCT GATCAATGAA
GCGAATGATG TCATTACTAA AAAATATGCA CAGATCACCC AACAGAAGGA TACCCTGATC
GCCGATTCAA CAATAACCAT GCCGACCGGA AAGACAATCT CATTCATTGG AAAAGCCAGC
CCGCTCTACA ATCAGCAGGG AGAGGTCGTT GGTGCAATCG AAACCATCCG GGACATCACC
GAGTTAAAAT CGGCGGAAGA GAGTCTGCGT GAAAGTGAAG GACGGTTCTC CGCATTCATG
GAGCACCTGC CAGTAACGGC GTTCATCAAA GATGATCAAT CCACCAACCT CTTTGTCAAC
AGACGTATGG TGGAGGTCTT TGGCGAGCAG GAATGGATTG GAACCTCCGT CTATAACCAG
TTTCCAAAGG AAGCGGCAGA AAAGATGGTC GAAGACGATC ATCAGACACT CAGGGATGGC
TATCGAAGAA CCATTGAAAC CCTTCAGGGA AGAGATGGCA CCAAAAAAAT TTATGAGACC
TATAAATTCC GGATCGATCG TGAGAAAAAA CCACCGCTGA TCGGTGGTTT CGCAGTGGAT
ATCACCGACC AGAAACAAGT TGAAGATGCT CTCCGCGAGA GCGAAGAACG ATATCGAAAT
GTTGTCGAAG ACCAGACCGA ATTTATCTCG CGGTTTTTAC CTGACGGGAC GCATGTCTTT
GTGAACGAGG CATATTGCGG GTATTTCGGA ATGAAACGTG ACGAGATCCT CGGGCACCGA
TTCCGGCCAA ATATCCCCAT CGAAGACCAG GAGCCCGTGA AACAGTTCTT TGAATCCTTA
ACACCAGACC ACCCCGCCGA TTCCATTGAA CATCGGATCA TCATGCCGGA TGGCACCATA
CGATGGCACC GATGGAACGA CCATGCGATC TTCGATCCTT CTGGAACGAT CGTCGAATAT
CAGTCAGTGG GCCAGGACAT TACCGAACAG AGACAAAAGG AGCAAGTACT GTATGAAAAC
GAACAACACC TGAATTCCAT CTATAATACT GTCGAAGACG TCATCTATCA ACTGACCGTC
GAACCTGGTG GGCAGTACCG TTTTACTTCC GTTAACGCGG CTTTTAGCAG AATAACCGGA
ATTCCCACTG AGGAAATTTT CGGCAAGACA GTGAACGAGA TCATCCCCGA ACCGTCTCTC
TCCATGGTTC TGGAAAAATA CAGACAGGCC ATCGATGAAA AGACCCTCGT TCACTGGGAG
GAGATCTCAG TCTACCCCAA TGGACAGCTG ACCGGAGAAG TCAGCATCGC TCCCATCTTT
GATACGGAAG GAAACTGTAC ACACCTCATC GGATCGGTGC ATGACATCAC CGAGCGCAAA
CGGATAGAAC ACACACTGCG AGAGAGCGAG GAAAAGTTCC GCTCTCTTGC TGAGAGCAGC
CCGGATTATA TCATGCGGTA TGACCAGAAG TGTCGCCATA CCTACATGAA CCCCGCGGCA
CTCCTCGCAT CAGGACTTAC AAAAGAACAG ATTATTGGCA AAACACACCG CGAAAGCGGA
TATGACGATG ACCTGAGCAA GTTCTGGGAA GAGAGAATAA CCGGGGTCTT TGAGACCAGG
AAACCGTTCC AGACCCAGTT CGCATGGGAC AGTGTCGACG GACGAGTAGT TCTTGACTGG
ATGCTGACCC CGGAATTCTC TGATGACGGA ACGGTTCGAT CGGTACTGGG CGTATCACGG
GATATTACGC AATTAAAACT GATAGAAGAG GAACTTTTAA GGAAAAACGA AGAACTTTAC
GCTTCCTATG AGCAGATCGC CGCATCAGAA GAGGAACTAC GGTCCAATTT AGAGGAACTG
AGACGACAGG AGATGGCGCT GCGGGAGAGC GAAGAGCGCT ACCGGAAGAT CTTCGAGAAC
AGCCCGCTTG GCATGGTCCT TGCCACGCCG GATTTTCGAT TTATTTCTGT CAACCCCACT
TGGGTAACCA TGACCGGCTA TAGTGAAGAG GAATTGATTC ACCTCTCATT TACGGATATC
ACGCATCCGG ATAATCTCGC CGGCGACCTG GAACATATGA AGGACCTTGC TGCGGGAACA
ATTCCGGTAT ATGGTACGGA AAAACGGTAT ATCAGAAAAG ACGGCAGCAT CCTCTGGGGA
TTACTCAGGG TGACGGCGAT CCGTGATCAC CAGGGTTCGC TCAGTTATTT CGCAGGTCAG
ATAGAGGATA TCACCGAGCG CAAACTGGCT GATGATGCAC TGCTGGAGAG CGAGGAGAAG
TATCACAATC TCTATCGTAA TTCCACCCTC GGTATCTTCC ATTCCACCAT GGAAGGAAAA
TTTATCGATG TCAACCCTGC TATGGCAAGG ATGCTGGGGT ATACCGATCC GGAAGAGGTG
GTAACTGCTA TCACCAGTAT TGCCGATCAG GTCTATGTTG AACGACCAAT GTACGACAGT
GTCGTACAGG GCATGCTGGA GGGAGGAGGA ATCATCAACA GAGAGAACCA CTATCGTCGG
AGAGACGGTA CCCAGTGGTA TGGAAATCTG AATCTGCGTA TTGTTCCTGA TCAACAGGGC
AAACCACACC ATTACGAAGG GTTCGTAGAG GATATCACTG AACGCAAACT GGCTGAAGAA
ACGCTTCGTA CTAGCAAAGA TCAGTATGAT ACTATGGTCT CACATATACC CGTGGGCATC
TACATCCTGC GTGGTACACC AGAGGGATCC TGCTCGTTCG ACTTTGTCAG CCCTAAACTG
GCAGAGATGT TCAACGTGAG TGCCGAAAAT TTTCTGGCAG ATCAGAAGAT GGGGTTCGAA
CCGATACACC TCGATGATTT AAGATCTCTC CTCAAATTAA GTTATGAAAA ATATTATCAG
AAGCGATTTC AACAACCGCA ACTCTTCGAA TGGGATGGAC GGACTCTCGT CGGGGGGGAG
GTAAAGTGGA TTCATATTGA ATCATCACCC GTGCTGCAGG AAAATGGAGA TGTCTTATGG
AATGGCATCG TGACCGACAT CACCGAGCGC AGGCGGGCAG AGGAAGGTCT TCGCCGGGCA
AACAGAAAAC TCACCCTTCT GTCAGGTATC ACGCGTCATG ACCTGAAAAA TCAGATCCTC
TCTTTAAATG GATATCTTGA AATTTCAAAA GAATATATCG ATGACGCCGC AAAGATGTCG
GAATACCTCA CGAAGGAAGA GGAGATTACA AAAAAAATTG AAGGCCAGAT CGCCTTCACC
GAAGAATACG AGGCGATTGG CGTCAATGCT CCCACATGGC AGGACTGTCG CACTCTTGTC
GAGATCGCGT CACAACAAGC TTCGCTTGGA AATATCACAG TCAAAAATGA TATTCCCTCA
AAAATAGACG TCTTTGCCGA TCCGTTAATT ATCAAGGTCT TTTACAACTT GATGGATAAT
GCAGTCAGGC ATGGTGGGAC AATTACGACC ATACGGTTCT CTGCGCAGGA ATCTGGTGCT
GATCTTCGTG TCATCTGCGA GGATGACGGC ATTGGCATCC TAGCAGGGGT AAAGGAGAAG
ATCTTCGATC ACGGGGTGGG GAAGAACACA GGACTCGGAC TCTTTCTCAC CCGCGAGATC
CTGTCCATCA CCGATATCAT CATCCAGGAG AACGGAGAGC CGGGGAAAGG AGCACGCTTC
GAGATCACAG TGCCGAAAAA GGGATGGACC GGCTTCCTAT CCCACAATGG GGTGGAGTGA
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| Protein sequence | MPFQDLNMTD SGSESTKNKI SILYVDDEQD LLTVTKFFLE RAGEFRVDTM TSAQEALNSP
LIQSYDVIIS DYQMPGMDGI AFLKAVRERF GTIAFILFTG RGREEVVIDA INNGADFYLQ
KGGEPKSQFA ELTHQIRRAV QQRRAEISIR DLERREADII DFLPDATFAI DRFGTIIAWN
RAMEEMTGVP TRDILGKGDY EYSIPFYGQR QPSLIDLINE ANDVITKKYA QITQQKDTLI
ADSTITMPTG KTISFIGKAS PLYNQQGEVV GAIETIRDIT ELKSAEESLR ESEGRFSAFM
EHLPVTAFIK DDQSTNLFVN RRMVEVFGEQ EWIGTSVYNQ FPKEAAEKMV EDDHQTLRDG
YRRTIETLQG RDGTKKIYET YKFRIDREKK PPLIGGFAVD ITDQKQVEDA LRESEERYRN
VVEDQTEFIS RFLPDGTHVF VNEAYCGYFG MKRDEILGHR FRPNIPIEDQ EPVKQFFESL
TPDHPADSIE HRIIMPDGTI RWHRWNDHAI FDPSGTIVEY QSVGQDITEQ RQKEQVLYEN
EQHLNSIYNT VEDVIYQLTV EPGGQYRFTS VNAAFSRITG IPTEEIFGKT VNEIIPEPSL
SMVLEKYRQA IDEKTLVHWE EISVYPNGQL TGEVSIAPIF DTEGNCTHLI GSVHDITERK
RIEHTLRESE EKFRSLAESS PDYIMRYDQK CRHTYMNPAA LLASGLTKEQ IIGKTHRESG
YDDDLSKFWE ERITGVFETR KPFQTQFAWD SVDGRVVLDW MLTPEFSDDG TVRSVLGVSR
DITQLKLIEE ELLRKNEELY ASYEQIAASE EELRSNLEEL RRQEMALRES EERYRKIFEN
SPLGMVLATP DFRFISVNPT WVTMTGYSEE ELIHLSFTDI THPDNLAGDL EHMKDLAAGT
IPVYGTEKRY IRKDGSILWG LLRVTAIRDH QGSLSYFAGQ IEDITERKLA DDALLESEEK
YHNLYRNSTL GIFHSTMEGK FIDVNPAMAR MLGYTDPEEV VTAITSIADQ VYVERPMYDS
VVQGMLEGGG IINRENHYRR RDGTQWYGNL NLRIVPDQQG KPHHYEGFVE DITERKLAEE
TLRTSKDQYD TMVSHIPVGI YILRGTPEGS CSFDFVSPKL AEMFNVSAEN FLADQKMGFE
PIHLDDLRSL LKLSYEKYYQ KRFQQPQLFE WDGRTLVGGE VKWIHIESSP VLQENGDVLW
NGIVTDITER RRAEEGLRRA NRKLTLLSGI TRHDLKNQIL SLNGYLEISK EYIDDAAKMS
EYLTKEEEIT KKIEGQIAFT EEYEAIGVNA PTWQDCRTLV EIASQQASLG NITVKNDIPS
KIDVFADPLI IKVFYNLMDN AVRHGGTITT IRFSAQESGA DLRVICEDDG IGILAGVKEK
IFDHGVGKNT GLGLFLTREI LSITDIIIQE NGEPGKGARF EITVPKKGWT GFLSHNGVE
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