Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1026 |
Symbol | |
ID | 3924634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1155139 |
End bp | 1156818 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637896664 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_502495 |
Protein GI | 88602317 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTCTG AAGTCCGTGT ACTCCATGTT GATGACGAGC CCGTCATATG TGATTTAACC AAGTTGAGCC TTGAAAAAGG TGGACGACTC AAAGTCGATG TGGCCTCTTC AGCTGAAGAA GCATTGGATC TTATCAGGTC GGGTTCATAT TCTTGCATCA TTTCAGACTA TGAAATGCCA ATAATGAACG GGCTCGATTT TTTAAAAGAG GTTCGAAATA TTGACCAGGA CATTCCGTTC ATCCTTTTTT CAGGAAGAGG GCGTGAGACA GTCATCATTG ATGCTATAAA TACCGGAGCA GATTTTTACA TCCAAAAAGG CGGCGAACCA AAAGCACTGT TTGCCGAACT CAAGCATAAA GTGGAGTATG CCATTCAACA GCGTAATACG CGCATAGCAC TTAAAAGAAG AGATGGTATT TTGGAAGCCG TCAGCCTGGT CGCGAATCTG TTTCTTGGTG GTGAAGCATT TGATCGGGCC CTGCAGGAGG CAATTACCCT TTTTGGTCTG GCAACCGAAG TGGATACCGT CAGACTGTTC AGACTGAATT CAGATTCAGA AGACACAGAT ACACATCACT CCATAAAAAA TATAGCTTCA TGGACAAGGA TTACGATTCA GACAGATGAA CGGGAGCAAT ACATAAAAAC CAATAATATC CCGGTGGAAA AGGGACTTTT ATCCCGTCTT GTAAGGGGTG AGACCCTCAT CCTCAATGCA TCAGAGATCC AGATGTATGA TCCTCTTAAG GGTGGAATAA GTGCAAAATC CATCGCCGTA TTTCCGGTTT TTGTTGATCA GAAAGTCTGG GGTATCTTTT GGTTTGCTGA TTACATGAGT GAGCGGACAT GGACTGGTGT GGAGATTGAT GCTCTGCTCG CCGCATCAGC CATGATAGGT TCTGCTATCC AGCAGGATCA GATGCGACGA TCGCTTATTG CAGCCAAGGA AGAATATGCA TCCATGTATG CCCTGATGAG ACGGCTTTGT GATACGGTCC CGGACATTTT ATGGGCAAAA GATATTGATG GATCATTCCT CTTTGTAAAC CAGGCAGGTT CTCATCTGCT CTGTGCAGAA AATACCAGTG ATCCGGTAGG CAAAAGAGAG GAGGATTATC CCTGTGGACT TATTCATCAT GGAATGTCAG AGTGCAAAAA TGTGAGCCAT CATAATATAA ATGGGAGAAT ATCTCTCAAA ACCGGATCAG AGGTCACTGA ACTGGATATT ATCACGGTCC CATTTGTCAA TACCGAAGGA AACCAGATAG GAACTGTTAC GTTAGGCAGG GATATTACCA ATTATTGTAA AATTGAGCAG GGTCTTCGAA TATCGGAGAA GAGATATGAA AATATCATCC GTGCCATCCA CATCGGAATA CTTGTGGTTT CAGGAGATGG AGTTATCAAA GATATTAATC CCCGTGCCTT GGAATTACTG GATGCACGAA AAAGTGAGAT AATTGGAACA TCCCTCAGTA AAAACCGGAT TCTCCGTGAG ATGGAAGTAT CAGATGCAGT TCGTGAAGTG ATATCGACTG GAAATGGCAT TTCTTTCCTG ACATCACGCT CGGTTACCAG AACCTCTGAA GATCTGTACT GTATGGTAGG ACTGCTGGTC CCGGAAAACG GAGGGGAAGC TGAGGTTCTT ATCACTCTCG ATCCCCATTA CTCAGAATAA
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Protein sequence | MNSEVRVLHV DDEPVICDLT KLSLEKGGRL KVDVASSAEE ALDLIRSGSY SCIISDYEMP IMNGLDFLKE VRNIDQDIPF ILFSGRGRET VIIDAINTGA DFYIQKGGEP KALFAELKHK VEYAIQQRNT RIALKRRDGI LEAVSLVANL FLGGEAFDRA LQEAITLFGL ATEVDTVRLF RLNSDSEDTD THHSIKNIAS WTRITIQTDE REQYIKTNNI PVEKGLLSRL VRGETLILNA SEIQMYDPLK GGISAKSIAV FPVFVDQKVW GIFWFADYMS ERTWTGVEID ALLAASAMIG SAIQQDQMRR SLIAAKEEYA SMYALMRRLC DTVPDILWAK DIDGSFLFVN QAGSHLLCAE NTSDPVGKRE EDYPCGLIHH GMSECKNVSH HNINGRISLK TGSEVTELDI ITVPFVNTEG NQIGTVTLGR DITNYCKIEQ GLRISEKRYE NIIRAIHIGI LVVSGDGVIK DINPRALELL DARKSEIIGT SLSKNRILRE MEVSDAVREV ISTGNGISFL TSRSVTRTSE DLYCMVGLLV PENGGEAEVL ITLDPHYSE
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