Gene Mhun_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1723 
Symbol 
ID3924927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1942841 
End bp1945135 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content47% 
IMG OID637897345 
Productsignal transduction histidine kinase 
Protein accessionYP_503165 
Protein GI88602987 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA TTCTCCTGGT TGACGATGAA CCAGATCTCC TTGATCTCGA ACGGCGCATT 
CTCGAGCAGA AATATGGTTT TTATACCATA ACTGCCGAAT CAGGAAAAGA AGCCCTGGAG
ATATTTCAGA GTCAGCAGGT GGACGCGATC ATATCTGATT ATTCCATGCC ACAGATGGAT
GGGATCACCC TTCTTCGAAA GATTCGGGAG ATTGATACTG CAATTCCCTT TATCCTCTTT
ACTATCAGGG AGAAGGAGGA TATCGCAATC GAAGCGATGA ACAGCGGAGC GAACTTTTAT
GTGCAGAAAG AGAACCTCCC CCAGGTTGTC TTTGCCGAAC TGGCCCATGA TGTCACAAAA
GCCGTTGAAC TCTTCAGAGC AGAGAAAAAT CTGAAGATAC AGCGTGATCT AGCTCTTGCC
AATGCGAATG CCAAAAGCCT TGAAGAGACG CTTCTTATCT GCACCCGTGC CATCCTCGAT
GTCTCCGGGA TGGAGGGTGT TGCAATCTAT CTCTTTGAAG AGAAAAATCT GAACGTTGCA
ATCATCAGCG GTTCTTCTGA ACACTATTCC AGTAAACGGG TCCAGTCAGA GGTACAGCAG
ATGCTTCATT CGGTCATTCA GCAGAAGACT CCGATCTTCC GTGATGAAGA GGATATTCGG
GCAGTCACTC CCATCCTGTT TGAGAGTGAG GGTATCCGCT CTGATGGAAT ATTCGGAATG
AGTCATCATG GGAAGACCAT TGGCGGTGTG CATATCTTCA CATCATCTCC GCTTAAGACC
TATGGCCTCT CTCTTCAGCG ATTTATCACC GATATCGTCG TGCAGGTATC CGGGTATATA
TCGGACCGGC TCGCAGAAGA GGCACTTCGG ACCAGTGAGA ACCGGATGAA GGCCATGATC
CGGAATCTTC CCGGTATGGT GTATCAGGGG CATATTGATG AAGAACGGAC CATGGAGTTT
GTCAGCGAGG CTGTCTTTAA TCTGACCGGG TACTACCCCA GGGATATTAT GCATAACGCC
GTTCGCTCAT GGGGCTCCTT TATCAATCCT CAGGACCGGG TCAGGATCCT TGAGGTCATC
ACCCGGGCGG TCCAGAAGAA TGTGCGATTC AGACTCACAT ACCGGATTAC GACTAGGGAT
AACAAGTACC GGTGGGTATC TGAGCAGGGG ACCGGTATCG TAGATGCTGA TGGAAACCTT
GCGGGAATAG AAGGGATCAT TATGGACATC ACCAGACAGA AAGCTCTTGA TGACCAGGTC
CGGATGTTCC ATACCAGGCT GAAAACACTT TTTATGCTGA TGGCTGCAGG ATGTCTTATC
TTTAAAAGTG ACGGGACCAT CAGGAATACC ATACTTGTTG ATCTGAATAG TGCTGCAGAA
AAGACTGAGC AAAAAAAGAA GACTGAATTG ATAGGTATCA CATTTCAGGG ATTATTTAAA
AAGGCTGATC CTGAATTGCT GGAAGCTATC ACCGGGATGC TTGAGGATAA GAAATCCCGT
ACTCTGCAGA AATGTGCTAT CACCTACCCG TACGGGAAGC GGTATTTTGA TATCTTTCTC
AGCAGTTCTC CGGTGGGTTA TGAACGAACT GACCTTGAAA TATTTCTAAT CTATAATGAT
GTAACAAACC GGGTACTGAC CGAGCAGCAG ATCATCACAT CTCTCCATGA AAAGGAACTT
CTGCTCAAGG AAGTGCACCA CCGGGTAAAA AATAACCTGC AGATAATCTC CGGGATTTTA
AAACTCCAGT CTATGAGAAT CCAGGATCCC CGGGCAGCGG AGATCATCCA GGAGTGTCGG
AACCAGGTCT ATACCATGGC ATCCATACAT GAGCTCTTAT ATAACTCAAA AGATATTGGT
AAGATACAGG TAGAAGAATA TATAAGCAGA CTGGTTGATC ATTTTAAACA GGAATATGAG
GGGATATCTG CACGGCTGAA CCTTCGTGTC TCGGTTGATG CCGATATTGT GCTGGACATT
GAGCGGTGTA TACCATGCGG ATTGATTCTG AATGAACTTA TCATGAATGC AGTGAAATAT
GCATTTCAAC CGGATGGGGA AGGGGAGATC AGAATTTCAT TTACCCAGGA TGCATCCTCG
TATCGCTTAC AGGTATCAGA TGATGGACAG GGCCTTCCAA AGGATTTCGA TGCCAGAAAA
AGCCAGTCCC TTGGCATGGA ACTGACCTCC CAGCTGACCC ACCAGTTACG GGGAAAACTC
GAGATTAGCA GTGAGAAAGG GGCGACATTC ACGATAACAT TTCCAAAGAC GGAGGAAGGC
AGGATAAAAA CATGA
 
Protein sequence
MIRILLVDDE PDLLDLERRI LEQKYGFYTI TAESGKEALE IFQSQQVDAI ISDYSMPQMD 
GITLLRKIRE IDTAIPFILF TIREKEDIAI EAMNSGANFY VQKENLPQVV FAELAHDVTK
AVELFRAEKN LKIQRDLALA NANAKSLEET LLICTRAILD VSGMEGVAIY LFEEKNLNVA
IISGSSEHYS SKRVQSEVQQ MLHSVIQQKT PIFRDEEDIR AVTPILFESE GIRSDGIFGM
SHHGKTIGGV HIFTSSPLKT YGLSLQRFIT DIVVQVSGYI SDRLAEEALR TSENRMKAMI
RNLPGMVYQG HIDEERTMEF VSEAVFNLTG YYPRDIMHNA VRSWGSFINP QDRVRILEVI
TRAVQKNVRF RLTYRITTRD NKYRWVSEQG TGIVDADGNL AGIEGIIMDI TRQKALDDQV
RMFHTRLKTL FMLMAAGCLI FKSDGTIRNT ILVDLNSAAE KTEQKKKTEL IGITFQGLFK
KADPELLEAI TGMLEDKKSR TLQKCAITYP YGKRYFDIFL SSSPVGYERT DLEIFLIYND
VTNRVLTEQQ IITSLHEKEL LLKEVHHRVK NNLQIISGIL KLQSMRIQDP RAAEIIQECR
NQVYTMASIH ELLYNSKDIG KIQVEEYISR LVDHFKQEYE GISARLNLRV SVDADIVLDI
ERCIPCGLIL NELIMNAVKY AFQPDGEGEI RISFTQDASS YRLQVSDDGQ GLPKDFDARK
SQSLGMELTS QLTHQLRGKL EISSEKGATF TITFPKTEEG RIKT