More than 300 homologs were found in PanDaTox collection
for query gene Avin_47010 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_47010  Carbon monoxide oxidation transcription regulator, Crp/Fnr family: CooA  100 
 
 
220 aa  441  1e-123  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1089  Crp/FNR family transcriptional regulator  46.31 
 
 
218 aa  179  4e-44  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.3876 
 
 
-
 
NC_007519  Dde_3027  Crp/FNR family transcriptional regulator  38.28 
 
 
216 aa  151  8e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0066  transcriptional regulator, Crp/Fnr family  39.42 
 
 
220 aa  149  4e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3189  Crp/FNR family transcriptional regulator  41.23 
 
 
219 aa  144  9e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.84617 
 
 
-
 
NC_010581  Bind_2046  Crp/FNR family transcriptional regulator  40.49 
 
 
219 aa  141  9.999999999999999e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3790  transcriptional regulator, Crp/Fnr family  37.38 
 
 
226 aa  138  7.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000171716  n/a   
 
 
-
 
NC_013173  Dbac_0932  transcriptional regulator, Crp/Fnr family  39.53 
 
 
226 aa  136  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366643  n/a   
 
 
-
 
NC_011883  Ddes_0383  putative transcriptional regulator, Crp/Fnr family  40.28 
 
 
225 aa  135  3.0000000000000003e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.164826  n/a   
 
 
-
 
NC_007643  Rru_A1431  Crp/FNR family transcriptional regulator  34.62 
 
 
222 aa  130  1.0000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4494  Crp/FNR family transcriptional regulator  32.21 
 
 
232 aa  130  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.164578 
 
 
-
 
NC_013223  Dret_1233  transcriptional regulator, Crp/Fnr family  34.87 
 
 
225 aa  127  1.0000000000000001e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0234193  normal  0.501568 
 
 
-
 
NC_008751  Dvul_1134  CRP/FNR family transcriptional regulator  38.95 
 
 
223 aa  126  2.0000000000000002e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.972162  normal  0.0613651 
 
 
-
 
NC_011666  Msil_0800  transcriptional regulator, Crp/Fnr family  36.11 
 
 
224 aa  123  2e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0302672 
 
 
-
 
NC_009429  Rsph17025_3237  hypothetical protein  40 
 
 
261 aa  120  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2234  transcriptional regulator, Crp/Fnr family  32.46 
 
 
280 aa  112  5e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011365  Gdia_2894  putative transcriptional regulator, Crp/Fnr family  34.12 
 
 
224 aa  105  4e-22  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0602886  normal  0.0128159 
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  32.57 
 
 
219 aa  88.6  7e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  27.49 
 
 
225 aa  81.6  0.000000000000009  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  28.93 
 
 
228 aa  73.2  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  27.93 
 
 
219 aa  71.6  0.000000000009  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.19 
 
 
225 aa  71.2  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.44 
 
 
242 aa  71.2  0.00000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  27.47 
 
 
232 aa  70.5  0.00000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  28.8 
 
 
225 aa  70.1  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.93 
 
 
236 aa  68.6  0.00000000008  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.93 
 
 
236 aa  68.2  0.00000000009  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  28.7 
 
 
226 aa  67.8  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.9 
 
 
247 aa  67  0.0000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  27.72 
 
 
254 aa  67.4  0.0000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  26.87 
 
 
254 aa  67.4  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  67  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  66.2  0.0000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.85 
 
 
228 aa  65.9  0.0000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.31 
 
 
226 aa  65.9  0.0000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  28.24 
 
 
228 aa  65.5  0.0000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.96 
 
 
231 aa  64.7  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  24.43 
 
 
236 aa  64.7  0.000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  24.43 
 
 
236 aa  64.7  0.000000001  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.21 
 
 
231 aa  64.7  0.000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.84 
 
 
254 aa  63.9  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  29.69 
 
 
222 aa  62.8  0.000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  25.42 
 
 
234 aa  62.4  0.000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.7 
 
 
225 aa  62  0.000000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25.11 
 
 
225 aa  62  0.000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  28.18 
 
 
225 aa  61.6  0.000000008  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  28.24 
 
 
224 aa  61.6  0.000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  28.86 
 
 
256 aa  61.2  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.62 
 
 
225 aa  61.6  0.00000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  27.31 
 
 
225 aa  61.2  0.00000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  24.62 
 
 
228 aa  61.2  0.00000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  25.79 
 
 
217 aa  60.1  0.00000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  26.39 
 
 
228 aa  60.8  0.00000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  27.32 
 
 
239 aa  60.8  0.00000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  25.87 
 
 
254 aa  60.5  0.00000002  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  26.85 
 
 
226 aa  59.7  0.00000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  26.18 
 
 
229 aa  59.7  0.00000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  27.11 
 
 
230 aa  59.7  0.00000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  26.38 
 
 
227 aa  59.7  0.00000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.89 
 
 
267 aa  60.1  0.00000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  27.43 
 
 
229 aa  59.3  0.00000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.07 
 
 
225 aa  59.3  0.00000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  25.57 
 
 
238 aa  59.3  0.00000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  32.46 
 
 
236 aa  59.3  0.00000005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  22.96 
 
 
235 aa  58.9  0.00000006  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  26.2 
 
 
221 aa  58.9  0.00000007  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  25.81 
 
 
225 aa  58.5  0.00000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  26.55 
 
 
246 aa  58.5  0.00000008  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  25.81 
 
 
225 aa  58.5  0.00000008  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  25.93 
 
 
220 aa  58.2  0.00000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  25 
 
 
235 aa  58.2  0.00000009  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  26.44 
 
 
225 aa  58.2  0.00000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.36 
 
 
227 aa  58.2  0.0000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  22.22 
 
 
222 aa  57.8  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  24.61 
 
 
223 aa  57.4  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  24.62 
 
 
239 aa  57.8  0.0000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.06 
 
 
225 aa  58.2  0.0000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_46100  cAMP-regulatory protein  23.86 
 
 
215 aa  57.8  0.0000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3679  Crp/FNR family transcriptional regulator  23.64 
 
 
216 aa  57  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.170413  normal  0.193267 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  28.37 
 
 
224 aa  57  0.0000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  25.25 
 
 
227 aa  57  0.0000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  27.88 
 
 
263 aa  56.6  0.0000003  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  25.57 
 
 
236 aa  56.6  0.0000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003082  transcriptional regulator Crp/Fnr family  26.98 
 
 
231 aa  56.6  0.0000003  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00863529  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  28.41 
 
 
241 aa  55.8  0.0000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  25.89 
 
 
260 aa  56.2  0.0000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.18 
 
 
224 aa  55.8  0.0000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  24.2 
 
 
226 aa  55.8  0.0000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  25.31 
 
 
240 aa  55.8  0.0000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.14 
 
 
226 aa  55.5  0.0000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009439  Pmen_3943  cAMP-regulatory protein  24.24 
 
 
214 aa  55.5  0.0000006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  25.96 
 
 
225 aa  55.5  0.0000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  28.08 
 
 
222 aa  55.5  0.0000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_008740  Maqu_3550  cAMP-regulatory protein  24.62 
 
 
217 aa  55.1  0.0000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  24.43 
 
 
250 aa  55.1  0.0000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  24.56 
 
 
250 aa  54.7  0.000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  23.53 
 
 
250 aa  54.7  0.000001  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  30.52 
 
 
224 aa  54.7  0.000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.26 
 
 
225 aa  54.7  0.000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  25.48 
 
 
227 aa  54.7  0.000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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