Gene Avin_47010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47010 
SymbolcooA 
ID7763564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4772891 
End bp4773553 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID643807545 
ProductCarbon monoxide oxidation transcription regulator, Crp/Fnr family: CooA 
Protein accessionYP_002801781 
Protein GI226946708 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGAC CCGACGCCAG CAATCTGCTC GACAGCCTGG ACGCACTGAC CCAGGCAGCG 
CTGCTACAGG GCTTTCATCG GCGCCAGCTG ATCGAAGGCG AACTGCTCGG CAGCCCGAAC
AGCAAGCGCG ACAGCGTGTT CATCGTGCAC AGCGGACGCA TCCGGGTATT CCTCGCCTTC
GAGGACAAGG AATACACCCT CACTTTCCTC GAAGCCGGCG GTATCTACAG CACCCACAGC
CAGGCCTATG TCCAGGCCGT GCGCCCGAGC GAGGTACTGA TGGGCGACAC CGCGCAGATG
ACAGCTACCC TCCGCTCGCT GCCGAGCGCC GTGCCGGCGA TCATCCGCGT GCTCGGCGCT
ACCCTCGGCA ACTGCATGCG CATCATCGAG GACCTGGCCT TCCGCGACGT CGAGGGCCGC
CTGGCACGCT TTCTCGACGG CATGCTGGCG CGCAAGGGCC GCCCCCATCA GGACAGCCTG
CGCCTGGAAC TGGACCTCAA CACCGAGGAC ATCGCCCGCC TGCTCGGCAC AACCCGCCAG
ACCGTCTCCT CCCTGCTCAA CCGGATGGCC CGCGAGGGCA TTCTCAGCCG TGTCGGCAAC
GGCGTCTTCG ACATCCACGA TGCCGAACGC CTGCGAGCCC GCAGCCAGGT GTCCGCTGGC
TGA
 
Protein sequence
MHGPDASNLL DSLDALTQAA LLQGFHRRQL IEGELLGSPN SKRDSVFIVH SGRIRVFLAF 
EDKEYTLTFL EAGGIYSTHS QAYVQAVRPS EVLMGDTAQM TATLRSLPSA VPAIIRVLGA
TLGNCMRIIE DLAFRDVEGR LARFLDGMLA RKGRPHQDSL RLELDLNTED IARLLGTTRQ
TVSSLLNRMA REGILSRVGN GVFDIHDAER LRARSQVSAG