166 homologs were found in PanDaTox collection
for query gene Gdia_2894 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_2894  putative transcriptional regulator, Crp/Fnr family  100 
 
 
224 aa  444  1.0000000000000001e-124  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0602886  normal  0.0128159 
 
 
-
 
NC_010581  Bind_2046  Crp/FNR family transcriptional regulator  48.13 
 
 
219 aa  190  2e-47  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3189  Crp/FNR family transcriptional regulator  48.33 
 
 
219 aa  183  2.0000000000000003e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.84617 
 
 
-
 
NC_011666  Msil_0800  transcriptional regulator, Crp/Fnr family  47.87 
 
 
224 aa  183  2.0000000000000003e-45  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0302672 
 
 
-
 
NC_007643  Rru_A1431  Crp/FNR family transcriptional regulator  35.41 
 
 
222 aa  129  5.0000000000000004e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1089  Crp/FNR family transcriptional regulator  34.7 
 
 
218 aa  118  7.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.3876 
 
 
-
 
NC_013173  Dbac_0932  transcriptional regulator, Crp/Fnr family  32.08 
 
 
226 aa  114  8.999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366643  n/a   
 
 
-
 
NC_011146  Gbem_0066  transcriptional regulator, Crp/Fnr family  36 
 
 
220 aa  108  5e-23  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4494  Crp/FNR family transcriptional regulator  31.47 
 
 
232 aa  108  8.000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.164578 
 
 
-
 
NC_011830  Dhaf_3790  transcriptional regulator, Crp/Fnr family  31.63 
 
 
226 aa  108  9.000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000171716  n/a   
 
 
-
 
NC_013223  Dret_1233  transcriptional regulator, Crp/Fnr family  34.34 
 
 
225 aa  106  2e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0234193  normal  0.501568 
 
 
-
 
NC_012560  Avin_47010  Carbon monoxide oxidation transcription regulator, Crp/Fnr family: CooA  34.12 
 
 
220 aa  105  4e-22  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1134  CRP/FNR family transcriptional regulator  32.41 
 
 
223 aa  100  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.972162  normal  0.0613651 
 
 
-
 
NC_007519  Dde_3027  Crp/FNR family transcriptional regulator  28.5 
 
 
216 aa  95.5  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3237  hypothetical protein  31.82 
 
 
261 aa  82.8  0.000000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0383  putative transcriptional regulator, Crp/Fnr family  28.23 
 
 
225 aa  82.4  0.000000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.164826  n/a   
 
 
-
 
NC_011769  DvMF_2234  transcriptional regulator, Crp/Fnr family  32.41 
 
 
280 aa  77  0.0000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.87 
 
 
231 aa  71.2  0.00000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  28.5 
 
 
219 aa  65.1  0.0000000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.28 
 
 
225 aa  62.8  0.000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  23.4 
 
 
230 aa  62.4  0.000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  25.32 
 
 
232 aa  62  0.000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  30.2 
 
 
242 aa  61.6  0.000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.47 
 
 
225 aa  61.2  0.00000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.28 
 
 
225 aa  60.8  0.00000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.69 
 
 
254 aa  58.9  0.00000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  29.38 
 
 
220 aa  58.2  0.00000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25 
 
 
247 aa  57.8  0.0000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  28.86 
 
 
226 aa  57.8  0.0000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  30.77 
 
 
234 aa  57.4  0.0000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.85 
 
 
224 aa  57.4  0.0000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  29.09 
 
 
225 aa  56.6  0.0000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  22.92 
 
 
228 aa  56.6  0.0000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  22.78 
 
 
240 aa  56.6  0.0000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  27.03 
 
 
256 aa  56.6  0.0000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  30.69 
 
 
225 aa  55.8  0.0000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  26.47 
 
 
260 aa  55.5  0.0000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  22.54 
 
 
212 aa  55.1  0.0000008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  28.89 
 
 
222 aa  54.3  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.87 
 
 
226 aa  53.5  0.000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.64 
 
 
236 aa  53.5  0.000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  23.64 
 
 
236 aa  53.5  0.000002  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  22.84 
 
 
222 aa  53.9  0.000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  27.97 
 
 
232 aa  53.9  0.000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_011992  Dtpsy_1943  transcriptional regulator, Crp/Fnr family  33.33 
 
 
239 aa  53.1  0.000003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  22.48 
 
 
223 aa  53.1  0.000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  25.47 
 
 
251 aa  52.4  0.000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  23.68 
 
 
236 aa  52.4  0.000005  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  26.7 
 
 
225 aa  52.4  0.000005  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.64 
 
 
225 aa  52.4  0.000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  23.68 
 
 
236 aa  52.4  0.000006  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  28.23 
 
 
226 aa  52  0.000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  22.28 
 
 
230 aa  52.4  0.000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.07 
 
 
225 aa  52  0.000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  24.57 
 
 
220 aa  52  0.000007  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_012791  Vapar_2630  transcriptional regulator, Crp/Fnr family  32.54 
 
 
239 aa  52  0.000007  Variovorax paradoxus S110  Bacteria  decreased coverage  0.00642792  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  19.77 
 
 
228 aa  51.6  0.000008  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  22.53 
 
 
226 aa  51.2  0.00001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  25.95 
 
 
225 aa  51.2  0.00001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.07 
 
 
225 aa  51.6  0.00001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.83 
 
 
228 aa  51.2  0.00001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1779  Crp/FNR family transcriptional regulator  32.54 
 
 
239 aa  51.2  0.00001  Acidovorax sp. JS42  Bacteria  normal  0.72161  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  25.51 
 
 
227 aa  51.2  0.00001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  22.11 
 
 
230 aa  51.2  0.00001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  26.79 
 
 
224 aa  51.2  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_009720  Xaut_2083  CRP/FNR family transcriptional regulator  26.76 
 
 
258 aa  51.2  0.00001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.193038 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  27.05 
 
 
226 aa  51.2  0.00001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  25.39 
 
 
229 aa  50.4  0.00002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  28.57 
 
 
225 aa  50.4  0.00002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  27.27 
 
 
224 aa  50.8  0.00002  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  28.32 
 
 
236 aa  50.8  0.00002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.11 
 
 
228 aa  50.1  0.00002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  25.41 
 
 
229 aa  50.8  0.00002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  21.61 
 
 
230 aa  50.4  0.00002  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  22.58 
 
 
236 aa  50.1  0.00003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  32.54 
 
 
222 aa  50.1  0.00003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  25.13 
 
 
238 aa  50.1  0.00003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  25.13 
 
 
231 aa  49.7  0.00003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  22.73 
 
 
239 aa  50.1  0.00003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  22.61 
 
 
230 aa  49.3  0.00004  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  22.61 
 
 
230 aa  49.3  0.00004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  22.61 
 
 
230 aa  49.3  0.00004  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.81 
 
 
229 aa  49.3  0.00004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  22.61 
 
 
226 aa  49.7  0.00004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24.28 
 
 
229 aa  49.7  0.00004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009802  CCC13826_2145  hypothetical protein  22.7 
 
 
212 aa  49.7  0.00004  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  26.63 
 
 
225 aa  49.7  0.00004  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  22.61 
 
 
230 aa  49.3  0.00004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  27.93 
 
 
225 aa  48.9  0.00006  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_008825  Mpe_A1951  Crp/FNR family transcriptional regulator  37.27 
 
 
234 aa  48.9  0.00006  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.1084 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  25.14 
 
 
235 aa  48.9  0.00006  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.83 
 
 
228 aa  48.9  0.00007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.94 
 
 
225 aa  48.9  0.00007  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  22.11 
 
 
230 aa  48.5  0.00008  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  26.67 
 
 
231 aa  48.5  0.00009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013946  Mrub_0884  Crp/Fnr family transcriptional regulator  28.25 
 
 
214 aa  48.5  0.00009  Meiothermus ruber DSM 1279  Bacteria  normal  0.163926  normal 
 
 
-
 
NC_007948  Bpro_2959  Crp/FNR family transcriptional regulator  32.54 
 
 
241 aa  48.5  0.00009  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1058  CRP/FNR family transcriptional regulator  32.17 
 
 
258 aa  48.5  0.00009  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3287  Crp/FNR family transcriptional regulator  30.95 
 
 
239 aa  48.5  0.00009  Delftia acidovorans SPH-1  Bacteria  normal  0.370075  normal  0.683237 
 
 
-
 
NC_011992  Dtpsy_0976  transcriptional regulator, Crp/Fnr family  32.17 
 
 
258 aa  48.5  0.00009  Acidovorax ebreus TPSY  Bacteria  normal  0.859751  n/a   
 
 
-
 
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