Gene Daro_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1089 
Symbol 
ID3569926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1194182 
End bp1194838 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID637679551 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_284315 
Protein GI71906728 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.3876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTC ACGCCCATCT CGCCAGACCC GACCTCGCCG CCACGGCGCA TGAAGCACTG 
CTCGCCGGTT TCACGCTGCG CGAGTTGCCC AAAGGCTACC TGCTCTCGAC GCCGGAATCC
CCTCACAACC AGGTGCTGAT GGTCCATTCC GGGCGTTTAC GCGTTTATCT GGCCGGCGAC
AACCGGGAAC TCAACCTGAG TTTTCTTGAA GCCAGTGACA TCTACACGAC CCACACGCCG
ACCTATGTCG AAGCCGTTGT CCCGAGCAGC ATCTGGCTGA TCGACACGCC GACATTCGCC
CGCAAGCTGG CCACCGATCC CTCGGTAACG CCAGCCATGA TGCGGGTCAT GGGGCGCCTG
CTGAGCAATG CAGTCGGCCT CATCGAAGAC CTCGCCTTTC GCGAAGTGCC AGCCCGGCTC
GCCCGCTTTC TCTGGCAACT GGCCGAGCGG CGCGGCCATC GGCTGGAACA CGGCTGGCTG
GTACCGCTCG ATTTCAGCAT GCAGGACATC GCCAGCCTGC TCGGCACGAC GCGGCAGAGC
GTTTCCTCGC TGATCAACCA GTGGGAGCGC GAGGGTGTGC TGCAGCGCCA AAGCCGACGC
AGCCTGCTCG TCCCATCGCT CGATAGCCTG AAGGCACGCA GCACTCCCGT TCCTTGA
 
Protein sequence
MHAHAHLARP DLAATAHEAL LAGFTLRELP KGYLLSTPES PHNQVLMVHS GRLRVYLAGD 
NRELNLSFLE ASDIYTTHTP TYVEAVVPSS IWLIDTPTFA RKLATDPSVT PAMMRVMGRL
LSNAVGLIED LAFREVPARL ARFLWQLAER RGHRLEHGWL VPLDFSMQDI ASLLGTTRQS
VSSLINQWER EGVLQRQSRR SLLVPSLDSL KARSTPVP