| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1134 |
|---|
| Symbol | |
|---|
| ID | 4662162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1380781 |
|---|
| End bp | 1381452 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639819363 |
|---|
| Product | CRP/FNR family transcriptional regulator |
|---|
| Protein accession | YP_966581 |
|---|
| Protein GI | 120602181 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.972162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0613651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTCT CCGATGTCGA TCTTGTCGAA CTTCTTGAAC GTCCTGGCAA CAGATCATTC
TCCTCCATAT TCTCTTCACG CATCGTGATG CGCGGGCAAT CCGTCTTTCG GCCCGACATG
GAAGACGACA TGATCCTCAT TGTGCGTAGC GGTAGACTAC GTGTCTATCT TGCTTACGGC
GACAAGGAGT TCAGCCTTGC ATTTCTCGGG AAGGGAGACA TCTACAGCAG CCACACAGGC
GCGTATGTAC AGGCGTTGAC CGAAAGCGAG ATCGTGCTTG CCGAAACACA TCTCGTACAC
CGGCATATGG CATCAGTGAC TGCAATATCG TCTATCATGG TGCGCATCCT CGGGCAGATG
CTACGGTCGA GTTTCTTCCT CATCGAGAGC ATGGTCTTCA AGGACAGCAA CACCCGTCTG
GCAGCGCTCC TTCTTGAACA GGCAGAAGAC AGCGACAGGA ACAGACTACA ACCTGCCGAT
GACATGTCAG ATTTGCCTGA CATCCACCTT GAACTCACCA TGGAACAACT CGCCGGGCTT
GTGGGAACAA CCCGGCAGAC CGCATCCACC CTGCTCAACG ACATGATACG GGCGGGCATC
CTGCAACGCA GGGGGCGGGG ACACTTTGTG GTACTGGATA TGACCCGGCT ACGCGAAATA
GCCCTTCAAT GA
|
|---|
| Protein sequence | MRLSDVDLVE LLERPGNRSF SSIFSSRIVM RGQSVFRPDM EDDMILIVRS GRLRVYLAYG
DKEFSLAFLG KGDIYSSHTG AYVQALTESE IVLAETHLVH RHMASVTAIS SIMVRILGQM
LRSSFFLIES MVFKDSNTRL AALLLEQAED SDRNRLQPAD DMSDLPDIHL ELTMEQLAGL
VGTTRQTAST LLNDMIRAGI LQRRGRGHFV VLDMTRLREI ALQ
|
|---|
| |