More than 300 homologs were found in PanDaTox collection
for query gene VEA_001231 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0265  methyl-accepting chemotaxis protein  70.48 
 
 
561 aa  735    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0712  methyl-accepting chemotaxis citrate transducer  64.65 
 
 
546 aa  664    Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  82.66 
 
 
542 aa  888    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001231  methyl-accepting chemotaxis protein  100 
 
 
542 aa  1072    Vibrio sp. Ex25  Bacteria  normal  0.554422  n/a   
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  47.9 
 
 
558 aa  442  1e-123  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0070  methyl-accepting chemotaxis protein  47.54 
 
 
547 aa  442  1e-123  Vibrio cholerae O395  Bacteria  normal  0.740118  n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  45.52 
 
 
547 aa  432  1e-120  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2017  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
543 aa  259  9e-68  Shewanella sp. ANA-3  Bacteria  normal  0.75882  hitchhiker  0.00000661881 
 
 
-
 
NC_011313  VSAL_II0771  methyl-accepting chemotaxis protein  43.34 
 
 
661 aa  258  2e-67  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1434  methyl-accepting chemotaxis protein  38.61 
 
 
543 aa  255  1.0000000000000001e-66  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  32.01 
 
 
543 aa  234  3e-60  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.43 
 
 
712 aa  228  3e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.43 
 
 
712 aa  225  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
638 aa  225  2e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40 
 
 
713 aa  224  4e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
773 aa  221  3e-56  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
541 aa  220  5e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
716 aa  219  8.999999999999998e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
636 aa  218  2.9999999999999998e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
541 aa  214  2.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  39.88 
 
 
541 aa  211  2e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  39.71 
 
 
679 aa  209  9e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
674 aa  209  1e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
543 aa  207  4e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  37.79 
 
 
647 aa  207  4e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  40.36 
 
 
541 aa  207  4e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
558 aa  207  6e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  36.3 
 
 
638 aa  206  7e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  36.21 
 
 
647 aa  205  1e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  37.31 
 
 
672 aa  205  2e-51  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  40 
 
 
541 aa  204  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  40.82 
 
 
541 aa  205  2e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.54 
 
 
637 aa  204  3e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  38.35 
 
 
541 aa  204  3e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
573 aa  204  3e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
640 aa  203  5e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
425 aa  203  8e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
547 aa  203  8e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  37.44 
 
 
546 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  38.18 
 
 
541 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  40.55 
 
 
541 aa  202  9.999999999999999e-51  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  37.32 
 
 
639 aa  202  9.999999999999999e-51  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
541 aa  201  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
550 aa  201  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
541 aa  202  1.9999999999999998e-50  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
541 aa  201  1.9999999999999998e-50  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
552 aa  201  1.9999999999999998e-50  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
636 aa  202  1.9999999999999998e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
650 aa  201  3e-50  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  29.78 
 
 
549 aa  200  6e-50  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  36.87 
 
 
681 aa  200  6e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  37.33 
 
 
547 aa  200  6e-50  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
573 aa  200  7e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
674 aa  199  9e-50  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  30.78 
 
 
546 aa  199  1.0000000000000001e-49  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
653 aa  199  1.0000000000000001e-49  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
564 aa  199  1.0000000000000001e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
541 aa  199  1.0000000000000001e-49  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  39.56 
 
 
540 aa  199  1.0000000000000001e-49  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  39.71 
 
 
541 aa  199  1.0000000000000001e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  36.8 
 
 
558 aa  198  2.0000000000000003e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  40.11 
 
 
541 aa  198  2.0000000000000003e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
573 aa  198  2.0000000000000003e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
638 aa  197  3e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  37.82 
 
 
550 aa  197  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
572 aa  197  6e-49  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  36.86 
 
 
642 aa  197  6e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  36.76 
 
 
676 aa  196  8.000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
544 aa  196  1e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.65 
 
 
523 aa  196  1e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
541 aa  196  1e-48  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_010322  PputGB1_3184  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
541 aa  195  1e-48  Pseudomonas putida GB-1  Bacteria  normal  0.799555  normal 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  36.22 
 
 
559 aa  195  2e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
541 aa  195  2e-48  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  36.29 
 
 
642 aa  195  2e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
541 aa  195  2e-48  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  38.46 
 
 
543 aa  194  3e-48  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  37.8 
 
 
539 aa  194  3e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  30.64 
 
 
547 aa  194  3e-48  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
541 aa  194  3e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
541 aa  194  3e-48  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
638 aa  194  4e-48  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  37.8 
 
 
539 aa  194  4e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
542 aa  194  4e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  37.54 
 
 
541 aa  194  4e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  38.24 
 
 
541 aa  194  4e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  39.45 
 
 
623 aa  194  4e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  39.67 
 
 
541 aa  194  4e-48  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
552 aa  193  5e-48  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
638 aa  194  5e-48  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
572 aa  194  5e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
634 aa  193  6e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  36.89 
 
 
636 aa  193  6e-48  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
525 aa  192  9e-48  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  31.93 
 
 
558 aa  192  1e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  37.64 
 
 
533 aa  192  1e-47  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
438 aa  191  2e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  37.95 
 
 
673 aa  192  2e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
632 aa  192  2e-47  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  36.39 
 
 
541 aa  191  2e-47  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
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