More than 300 homologs were found in PanDaTox collection
for query gene Swoo_3576 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  100 
 
 
772 aa  1572    Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  40.98 
 
 
770 aa  605  1.0000000000000001e-171  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0559  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
773 aa  573  1.0000000000000001e-162  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
773 aa  494  9.999999999999999e-139  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
963 aa  340  5e-92  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  36.04 
 
 
1029 aa  314  3.9999999999999997e-84  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1698  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
963 aa  280  5e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009431  Rsph17025_4286  hypothetical protein  31.05 
 
 
687 aa  276  1.0000000000000001e-72  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1547  adenylate/guanylate cyclase with integral membrane sensor  34.3 
 
 
758 aa  273  9e-72  Cyanothece sp. PCC 7425  Bacteria  normal  0.592629  normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  32.54 
 
 
660 aa  266  1e-69  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_008577  Shewana3_0264  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
651 aa  259  1e-67  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00000238421 
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  31.34 
 
 
674 aa  258  2e-67  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  31.51 
 
 
1100 aa  253  8.000000000000001e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3758  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
651 aa  251  3e-65  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0458  methyl-accepting chemotaxis sensory transducer  29.88 
 
 
726 aa  250  9e-65  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.386076  n/a   
 
 
-
 
NC_009049  Rsph17029_1839  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
687 aa  244  3e-63  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0218  methyl accepting chemotaxis protein  30.55 
 
 
687 aa  244  5e-63  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4466  methyl-accepting chemotaxis protein  32.38 
 
 
651 aa  239  2e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
541 aa  239  2e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009438  Sputcn32_0380  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
651 aa  236  1.0000000000000001e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0274  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
651 aa  231  3e-59  Shewanella baltica OS155  Bacteria  normal  0.292308  n/a   
 
 
-
 
NC_009665  Shew185_0266  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
651 aa  232  3e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0270  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
651 aa  232  3e-59  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0274  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
651 aa  232  3e-59  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
637 aa  220  8.999999999999998e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.69 
 
 
541 aa  218  4e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
638 aa  216  9.999999999999999e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
544 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
541 aa  216  1.9999999999999998e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
636 aa  215  2.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
541 aa  215  2.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
638 aa  215  2.9999999999999995e-54  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  35.48 
 
 
639 aa  214  3.9999999999999995e-54  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
544 aa  214  7e-54  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  32.95 
 
 
629 aa  212  2e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  32.75 
 
 
629 aa  211  5e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
552 aa  211  5e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
564 aa  210  7e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  41.89 
 
 
714 aa  209  1e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  37.79 
 
 
621 aa  209  1e-52  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
638 aa  209  1e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
620 aa  209  1e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
545 aa  209  2e-52  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
545 aa  209  2e-52  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  35.44 
 
 
712 aa  209  2e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.08 
 
 
712 aa  208  3e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
638 aa  208  3e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.93 
 
 
545 aa  208  3e-52  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
545 aa  208  3e-52  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
620 aa  207  4e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
674 aa  207  5e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
620 aa  207  7e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
545 aa  207  8e-52  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
543 aa  207  9e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  36.17 
 
 
714 aa  206  2e-51  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
544 aa  206  2e-51  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  36.41 
 
 
713 aa  205  2e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
714 aa  205  2e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  38.94 
 
 
620 aa  205  3e-51  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
788 aa  205  3e-51  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  38.2 
 
 
541 aa  204  4e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  39.88 
 
 
714 aa  204  4e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
568 aa  204  4e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
552 aa  204  5e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.36 
 
 
637 aa  204  6e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
545 aa  204  7e-51  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
714 aa  203  8e-51  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
544 aa  203  8e-51  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
545 aa  203  8e-51  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  38.1 
 
 
545 aa  203  9e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.12 
 
 
638 aa  203  9.999999999999999e-51  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
716 aa  203  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
543 aa  203  9.999999999999999e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.09 
 
 
559 aa  202  1.9999999999999998e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
640 aa  202  1.9999999999999998e-50  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_012669  Bcav_0225  adenylate/guanylate cyclase with integral membrane sensor  30.52 
 
 
695 aa  202  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.590775  normal  0.132241 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  39.59 
 
 
714 aa  202  1.9999999999999998e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  35.97 
 
 
712 aa  201  3e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  39.05 
 
 
541 aa  201  3e-50  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  39.49 
 
 
545 aa  201  3.9999999999999996e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  37.43 
 
 
632 aa  201  3.9999999999999996e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
548 aa  201  5e-50  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
543 aa  201  6e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
543 aa  201  6e-50  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
620 aa  200  7e-50  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  37.6 
 
 
632 aa  200  9e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
548 aa  199  1.0000000000000001e-49  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.65 
 
 
645 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  35.42 
 
 
715 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
543 aa  200  1.0000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  36.84 
 
 
628 aa  198  3e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
545 aa  198  3e-49  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12462  cyclase  29.33 
 
 
730 aa  198  4.0000000000000005e-49  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  38.14 
 
 
543 aa  198  4.0000000000000005e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
636 aa  197  4.0000000000000005e-49  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
714 aa  197  5.000000000000001e-49  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
545 aa  197  7e-49  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  36.41 
 
 
541 aa  196  1e-48  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
560 aa  196  1e-48  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
620 aa  196  1e-48  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
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