More than 300 homologs were found in PanDaTox collection
for query gene Gura_2620 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009483  Gura_2620  response regulator receiver protein  100 
 
 		 239 aa  494  1e-139  Geobacter uraniireducens Rf4  Bacteria  normal  0.649971  n/a   
 
 
-
 
NC_013173  Dbac_2905  transcriptional regulator, LuxR family  33.49 
 
 		 335 aa  114  2.0000000000000002e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_013457  VEA_001275  transcriptional regulator VpsT  31.05 
 
 		 222 aa  98.2  1e-19  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0287  LuxR family transcriptional regulator  40.5 
 
 		 224 aa  95.9  5e-19  Vibrio cholerae O395  Bacteria  normal  0.1053  n/a   
 
 
-
 
NC_009784  VIBHAR_05152  protein-glutamate methylesterase  37.68 
 
 		 222 aa  94.7  1e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_1248  transcriptional regulator, LuxR family  30.4 
 
 		 232 aa  94  2e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_3306  LuxR family transcriptional regulator  38.69 
 
 		 238 aa  94  2e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3704  LuxR family transcriptional regulator  35.77 
 
 		 220 aa  91.7  9e-18  Magnetococcus sp. MC-1  Bacteria  normal  0.0339608  normal  1 
 
 
-
 
NC_011312  VSAL_I2858  probable CsgAB operon transcriptional regulatory protein  34.86 
 
 		 215 aa  90.1  3e-17  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.256874  n/a   
 
 
-
 
NC_007912  Sde_0994  response regulator receiver domain-containing protein  30.84 
 
 		 221 aa  88.6  8e-17  Saccharophagus degradans 2-40  Bacteria  normal  0.16925  normal  1 
 
 
-
 
NC_009784  VIBHAR_05153  hypothetical protein  36.44 
 
 		 218 aa  83.2  0.000000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001276  transcriptional regulator VpsT  34.06 
 
 		 210 aa  82  0.000000000000008  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.77 
 
 		 216 aa  81.6  0.00000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_002362  DNA-binding HTH domain-containing protein  31.47 
 
 		 214 aa  80.1  0.00000000000003  Vibrio sp. Ex25  Bacteria  normal  0.0501055  n/a   
 
 
-
 
NC_009784  VIBHAR_06533  hypothetical protein  31.72 
 
 		 217 aa  79.3  0.00000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A2814  LuxR family transcriptional regulator  33.33 
 
 		 214 aa  77.8  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_03706  hypothetical protein  30.77 
 
 		 214 aa  77  0.0000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  34.17 
 
 		 227 aa  77  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_008700  Sama_2948  response regulator receiver protein  29.45 
 
 		 221 aa  76.6  0.0000000000003  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.126231 
 
 
-
 
NC_009901  Spea_0633  LuxR family transcriptional regulator  31.85 
 
 		 224 aa  75.5  0.0000000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0560  transcriptional regulator, LuxR family protein  26.24 
 
 		 222 aa  75.1  0.0000000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_2605  transcriptional regulator, LuxR family  38.14 
 
 		 216 aa  74.7  0.000000000001  Escherichia coli DH1  Bacteria  normal  0.196673  n/a   
 
 
-
 
NC_011149  SeAg_B2048  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  75.1  0.000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0804096  n/a   
 
 
-
 
NC_009800  EcHS_A1158  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  74.7  0.000000000001  Escherichia coli HS  Bacteria  normal  0.354651  n/a   
 
 
-
 
NC_011080  SNSL254_A1238  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  75.1  0.000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.147361  normal  1 
 
 
-
 
NC_011094  SeSA_A1208  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  75.1  0.000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.316434  normal  0.419874 
 
 
-
 
NC_011083  SeHA_C1253  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  75.1  0.000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.705931 
 
 
-
 
NC_010468  EcolC_2559  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  74.7  0.000000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.980478  normal  0.382247 
 
 
-
 
NC_011205  SeD_A2231  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  75.1  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.750523  normal  0.99411 
 
 
-
 
CP001509  ECD_01037  DNA-binding transcriptional activator in two-component regulatory system  38.14 
 
 		 216 aa  73.9  0.000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_2093  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 190 aa  73.9  0.000000000002  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.661259 
 
 
-
 
NC_009801  EcE24377A_1159  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  73.9  0.000000000002  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_01044  hypothetical protein  38.14 
 
 		 216 aa  73.9  0.000000000002  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3887  LuxR family transcriptional regulator  29.44 
 
 		 221 aa  74.3  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.00000207134 
 
 
-
 
NC_011353  ECH74115_1419  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  73.9  0.000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.132272 
 
 
-
 
NC_009438  Sputcn32_3137  response regulator receiver protein  30.49 
 
 		 209 aa  73.6  0.000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0863  transcriptional regulator, LuxR family  30.49 
 
 		 221 aa  73.2  0.000000000003  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  32.39 
 
 		 215 aa  73.2  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  34.04 
 
 		 224 aa  73.2  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal  1 
 
 
-
 
NC_011138  MADE_01507  putative transcriptional regulator, LuxR family protein  32.09 
 
 		 159 aa  72.8  0.000000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.993499  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.57 
 
 		 208 aa  73.2  0.000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  33.11 
 
 		 248 aa  72.8  0.000000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  29.61 
 
 		 213 aa  72.4  0.000000000006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_004347  SO_0864  LuxR family transcriptional regulator  28.72 
 
 		 255 aa  72.4  0.000000000006  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3302  LuxR family transcriptional regulator  28.36 
 
 		 221 aa  72.4  0.000000000006  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3500  response regulator receiver protein  30.49 
 
 		 249 aa  72.4  0.000000000006  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  34.85 
 
 		 214 aa  72  0.000000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  33.58 
 
 		 218 aa  72  0.000000000007  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  30.82 
 
 		 213 aa  72  0.000000000008  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_008577  Shewana3_3414  LuxR family transcriptional regulator  29.27 
 
 		 221 aa  71.6  0.000000000009  Shewanella sp. ANA-3  Bacteria  normal  0.295313  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  31.91 
 
 		 218 aa  71.2  0.00000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_3096  regulatory protein, LuxR  31.43 
 
 		 222 aa  71.6  0.00000000001  Shewanella denitrificans OS217  Bacteria  normal  0.735562  n/a   
 
 
-
 
NC_008321  Shewmr4_0720  LuxR family transcriptional regulator  29.27 
 
 		 221 aa  71.6  0.00000000001  Shewanella sp. MR-4  Bacteria  normal  0.0333677  normal  1 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  35.94 
 
 		 222 aa  71.2  0.00000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  35.77 
 
 		 223 aa  71.2  0.00000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  27.97 
 
 		 216 aa  70.5  0.00000000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  31.67 
 
 		 213 aa  70.5  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_009436  Ent638_1556  DNA-binding transcriptional regulator CsgD  38.14 
 
 		 216 aa  70.9  0.00000000002  Enterobacter sp. 638  Bacteria  normal  0.417219  normal  0.369793 
 
 
-
 
NC_011894  Mnod_6717  transcriptional regulator, LuxR family  36.13 
 
 		 509 aa  69.7  0.00000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.440846  n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  29.2 
 
 		 218 aa  70.1  0.00000000003  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_009831  Ssed_3945  LuxR family transcriptional regulator  27.07 
 
 		 221 aa  70.1  0.00000000003  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00801334  normal  0.811932 
 
 
-
 
NC_007948  Bpro_2432  two component LuxR family transcriptional regulator  34.75 
 
 		 246 aa  70.1  0.00000000003  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  29.2 
 
 		 218 aa  70.1  0.00000000003  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_009997  Sbal195_0875  LuxR family transcriptional regulator  29.88 
 
 		 221 aa  69.7  0.00000000004  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0840  response regulator receiver protein  29.88 
 
 		 221 aa  69.7  0.00000000004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  33.9 
 
 		 218 aa  69.3  0.00000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  33.09 
 
 		 220 aa  68.9  0.00000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  32.62 
 
 		 225 aa  68.9  0.00000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  30.82 
 
 		 230 aa  68.9  0.00000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_0272  two component transcriptional regulator, LuxR family  32.56 
 
 		 218 aa  68.6  0.00000000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.353555  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  28.08 
 
 		 217 aa  68.6  0.00000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  30.13 
 
 		 245 aa  68.2  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal  1 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  39.36 
 
 		 209 aa  67.8  0.0000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  32.85 
 
 		 217 aa  67.8  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  30.16 
 
 		 215 aa  68.2  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  33.86 
 
 		 207 aa  67.8  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_012791  Vapar_3549  transcriptional regulator, LuxR family  51.72 
 
 		 1022 aa  67.4  0.0000000002  Variovorax paradoxus S110  Bacteria  normal  0.642921  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  33.33 
 
 		 219 aa  67.8  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  28.77 
 
 		 237 aa  67  0.0000000002  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  33.33 
 
 		 221 aa  67.4  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  30.41 
 
 		 253 aa  67.4  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.08 
 
 		 258 aa  67.4  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.58 
 
 		 222 aa  67.4  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal  1 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  31.88 
 
 		 218 aa  67.8  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  31.79 
 
 		 222 aa  67  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009654  Mmwyl1_3333  response regulator receiver protein  27.03 
 
 		 196 aa  67.4  0.0000000002  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.458286 
 
 
-
 
NC_009092  Shew_3194  LuxR family transcriptional regulator  29.1 
 
 		 220 aa  67  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  0.0232917  normal  0.227391 
 
 
-
 
NC_010506  Swoo_0644  LuxR family transcriptional regulator  27.5 
 
 		 221 aa  67.4  0.0000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0140532  unclonable  0.00000001613 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  33.1 
 
 		 218 aa  66.6  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008009  Acid345_3502  two component LuxR family transcriptional regulator  33.33 
 
 		 228 aa  67  0.0000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  29.65 
 
 		 215 aa  66.6  0.0000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  25.89 
 
 		 220 aa  66.2  0.0000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  29.17 
 
 		 212 aa  66.2  0.0000000004  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  29.67 
 
 		 242 aa  66.2  0.0000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  31.03 
 
 		 215 aa  66.2  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  33.86 
 
 		 206 aa  66.2  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  33.33 
 
 		 221 aa  65.9  0.0000000005  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  30.06 
 
 		 260 aa  65.9  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal  1 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  34.45 
 
 		 225 aa  66.2  0.0000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.000789071 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  31.4 
 
 		 224 aa  65.5  0.0000000006  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
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