| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0720 |
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| Symbol | |
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| ID | 4251161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 839672 |
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| End bp | 840337 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117283 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_732857 |
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| Protein GI | 113969064 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0333677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATACTA TCAACGAGTT AGTTTTTCTG CATCAAGTGG CTGCGCCTTG CCATTTAGCG
ATACTCGCAG AATCTATCGG ATTAAAAACA CGGATTGTTA AACAGGCTTC CGAGCTAAAT
TTAGATAAAG GGCAACGCAG TTTTTGCCTT ATCGCCCAAA AAGGCGCTGC CTTAGATAAT
AAAGGCATTC CGCTGTTGGC CTCACGTCTG GTGCCCCATG TTCCCGTCGC TTTGTATCAA
GTCGAGCGTA ATTCCTTAGA CCAAGAGTCA GCCATGTTGC TGGGGATCCG CGGTCTGTTA
TTTGCGGATC AGCGGATGGA TTTGATGCTA ACGGGGCTGC GCAAAATGGT GGCCGATGAG
CTTTGGTACG ATAGAACCTT ACTCAGTAAG ATGTTTCGCC GGGTGGTGCA AAAGTTGGAT
GGGCAAAATG ATATGCCCGC CGATACCGTT GCCATGTTGC AAGCGCTTAC CTCAAGGGAG
CGAACCATTA TTCAGTTCGT CTCTAGCGGC GCGCGTAATA AGGAAATCGC CCATCGACTC
TGCATCAGTG AACATACGGT GAAGGCGCAT ATTTCCTCTA TTTTCCGTAA GACCCAGTCC
CGCAATCGTG TTGAGCTATT GCGTTGGGCT CAGACCTATC AAACACATTT TGAGTTTTGC
AGTTAA
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| Protein sequence | MNTINELVFL HQVAAPCHLA ILAESIGLKT RIVKQASELN LDKGQRSFCL IAQKGAALDN
KGIPLLASRL VPHVPVALYQ VERNSLDQES AMLLGIRGLL FADQRMDLML TGLRKMVADE
LWYDRTLLSK MFRRVVQKLD GQNDMPADTV AMLQALTSRE RTIIQFVSSG ARNKEIAHRL
CISEHTVKAH ISSIFRKTQS RNRVELLRWA QTYQTHFEFC S
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