| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0972 |
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| Symbol | |
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| ID | 4072960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1232472 |
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| End bp | 1233155 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982979 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_590049 |
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| Protein GI | 94968001 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.299836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0302219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GCACAGCAAC GAAAACCGTC CGCATACTGA TTGCCGACGA CCACACTATT
TTTCGCGACG GCCTGCGGCG GCTGCTGGAA TCGGAGCCGG AGTTTGATGT AATCGGCGAA
GCTGCCGATG GCGGAGAAGC GGTCCAGCAG GCGCGACGGC TGGGACCTGA CGTATTGCTG
CTCGACCTGG CAATGCCACG CGTTCCCGGC CTGGATGCGC TGCGCGAGCT GACTACCGAC
GACAGCTCGA CGAAGATCAT CATTCTGACT GCTGCGATTG AAAAAGCGCA GATCGTGCAA
GCGCTGCAGG CCGGTGCGAA GGGCATCATC CTGAAAGAGT CTGCGACGCA GCTGCTGCTC
AAGGGCATTC GCTCGGTGAT GGCCGGCCAG TACTGGGTGG GCCGCGAGAG CGTGAACGAC
ATCGTGGAGT ATCTGAAGTC CACGGCGGCC GGTGCACAGG CGGATTCGCA GGCCAAGAAC
TTCGGGCTCA CCAAGCGCGA GATGGAAATT CTCGGAACGA TTGTCGCGGG CTTTACCAAC
AAGGAGATCG CGAAGAAGTT CAACCTCAGC GAAGACACCG TGAAGCATCA CCTGACGAAC
ATTTTCGACA AGGTGGGCGT GTCGAGCCGG TTGGAACTGG CGCTGTTTGC GATCAACCAG
CGGTTGGCGG AACCGGTAAG CTAG
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| Protein sequence | MDKSTATKTV RILIADDHTI FRDGLRRLLE SEPEFDVIGE AADGGEAVQQ ARRLGPDVLL
LDLAMPRVPG LDALRELTTD DSSTKIIILT AAIEKAQIVQ ALQAGAKGII LKESATQLLL
KGIRSVMAGQ YWVGRESVND IVEYLKSTAA GAQADSQAKN FGLTKREMEI LGTIVAGFTN
KEIAKKFNLS EDTVKHHLTN IFDKVGVSSR LELALFAINQ RLAEPVS
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