| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3414 |
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| Symbol | |
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| ID | 4476757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4084416 |
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| End bp | 4085081 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728023 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_871043 |
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| Protein GI | 117921851 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.295313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTACTA TCAATGAGTT AGTTTTTCTG CATCAAGTGG CAGCGCCTTG CCATTTGGCG
ATACTGGCAG AATCTATCGG GTTAAAAACA CGGATTGTTA AACAGGCTTC TGAGTTAAAT
TTAGATAAAG GACAGCGCAG TTTCTGTTTA ATCGCCCAAA AGGGCGCGGC CTTAGACAAT
AAAGGGATCC CACTCTTAGC GTCACGTCTT GTGCCACATG TTCCCGTCGC TTTGTATCAA
GTCGAGCGTA ATTCCTTAGA CCAAGAGTCA GCCATGCTGC TGGGGATCCG CGGTCTGTTA
TTTGCAGATC AGCGGATGGA TTTGATGCTA ACGGGGCTGC GTAAGATGGT GGCCGACGAG
CTTTGGTACG ATAGAACCTT GCTCAGTAAG ATGTTTCGCC GTGTGGTGCA AAAGTTGGAT
GGGCAAAATG AGATGCCCGC CGATACCGTC GCCATGTTGC AAGCGCTTAC CTCCAGAGAG
AGGACCATTA TTCAGTTCGT CTCAAGTGGG GCGCGCAATA AGGAGATTGC CCATAGACTC
TGCATCAGTG AGCATACGGT GAAGGCGCAT ATTTCCTCTA TTTTCCGTAA GACCCAGTCT
CGCAATCGCG TTGAACTATT ACGTTGGGCG CAAACTTATC AAACCCATTT TGAGTTTTGC
AGTTAA
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| Protein sequence | MSTINELVFL HQVAAPCHLA ILAESIGLKT RIVKQASELN LDKGQRSFCL IAQKGAALDN
KGIPLLASRL VPHVPVALYQ VERNSLDQES AMLLGIRGLL FADQRMDLML TGLRKMVADE
LWYDRTLLSK MFRRVVQKLD GQNEMPADTV AMLQALTSRE RTIIQFVSSG ARNKEIAHRL
CISEHTVKAH ISSIFRKTQS RNRVELLRWA QTYQTHFEFC S
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