More than 300 homologs were found in PanDaTox collection
for query gene Tgr7_0272 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011901  Tgr7_0272  two component transcriptional regulator, LuxR family  100 
 
 		 218 aa  443  1.0000000000000001e-124  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.353555  n/a   
 
 
-
 
NC_007614  Nmul_A2674  two component LuxR family transcriptional regulator  32.8 
 
 		 203 aa  94.4  1e-18  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.125422  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  34.91 
 
 		 216 aa  92.8  3e-18  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  33.01 
 
 		 215 aa  89.4  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.36 
 
 		 222 aa  89.4  4e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.14 
 
 		 208 aa  88.6  8e-17  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.67 
 
 		 216 aa  87.4  1e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  31.55 
 
 		 213 aa  84.3  0.000000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  28.27 
 
 		 221 aa  84  0.000000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  34.16 
 
 		 213 aa  84  0.000000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  32.97 
 
 		 216 aa  84  0.000000000000002  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  34.71 
 
 		 224 aa  82.8  0.000000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  30.81 
 
 		 215 aa  82.8  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  32.8 
 
 		 224 aa  82.8  0.000000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  28.09 
 
 		 212 aa  82  0.000000000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  33.13 
 
 		 219 aa  81.6  0.000000000000008  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  29.67 
 
 		 220 aa  81.6  0.000000000000009  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  33.33 
 
 		 239 aa  81.3  0.00000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  31.35 
 
 		 215 aa  80.9  0.00000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  30.99 
 
 		 224 aa  81.3  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  31.93 
 
 		 218 aa  80.9  0.00000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  31.64 
 
 		 224 aa  80.1  0.00000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_007520  Tcr_0205  LuxR family transcriptional regulator  30.88 
 
 		 205 aa  80.1  0.00000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  32.35 
 
 		 225 aa  80.1  0.00000000000002  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008309  HS_0042  nitrate/nitrite response regulator protein  33.53 
 
 		 209 aa  80.5  0.00000000000002  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  31.47 
 
 		 212 aa  80.5  0.00000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  31.73 
 
 		 215 aa  80.1  0.00000000000002  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  34.34 
 
 		 209 aa  80.9  0.00000000000002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  32.43 
 
 		 216 aa  79.7  0.00000000000003  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  33.13 
 
 		 222 aa  79.7  0.00000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  32.43 
 
 		 216 aa  79.7  0.00000000000003  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  79  0.00000000000005  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_004347  SO_3982  DNA-binding nitrate/nitrite response regulator  33.73 
 
 		 209 aa  79.3  0.00000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  31.87 
 
 		 215 aa  79  0.00000000000005  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0970  two component LuxR family transcriptional regulator  34.34 
 
 		 209 aa  79  0.00000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0307407  normal  1 
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  35.12 
 
 		 209 aa  79  0.00000000000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_009831  Ssed_0929  two component LuxR family transcriptional regulator  34.94 
 
 		 209 aa  79  0.00000000000005  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000567962  normal  1 
 
 
-
 
NC_011663  Sbal223_3654  two component transcriptional regulator, LuxR family  33.73 
 
 		 209 aa  79  0.00000000000005  Shewanella baltica OS223  Bacteria  unclonable  0.000000000464283  hitchhiker  0.00000781977 
 
 
-
 
NC_008700  Sama_0646  response regulator receiver protein  33.73 
 
 		 209 aa  79  0.00000000000005  Shewanella amazonensis SB2B  Bacteria  normal  0.0492071  normal  1 
 
 
-
 
NC_009052  Sbal_0792  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  79  0.00000000000005  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000151034  n/a   
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  79  0.00000000000005  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  32.1 
 
 		 218 aa  79  0.00000000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  37.21 
 
 		 219 aa  78.6  0.00000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  34.32 
 
 		 215 aa  79  0.00000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  30.89 
 
 		 210 aa  77.8  0.0000000000001  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_009456  VC0395_0613  nitrate/nitrite response regulator NarP  31.45 
 
 		 208 aa  77.4  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  32.97 
 
 		 225 aa  77.8  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  33.96 
 
 		 212 aa  77.8  0.0000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  33.73 
 
 		 215 aa  77.8  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  32.32 
 
 		 222 aa  77  0.0000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal  1 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  24.88 
 
 		 211 aa  77  0.0000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_0657  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  77.4  0.0000000000002  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000493749  normal  0.229808 
 
 
-
 
NC_008322  Shewmr7_3365  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  77.4  0.0000000000002  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000651556  normal  0.0242167 
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  31.35 
 
 		 216 aa  76.6  0.0000000000002  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_008577  Shewana3_0656  two component LuxR family transcriptional regulator  33.73 
 
 		 209 aa  77.4  0.0000000000002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000830399  normal  0.140804 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  32.62 
 
 		 220 aa  77  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  30.22 
 
 		 215 aa  77.4  0.0000000000002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.94 
 
 		 213 aa  76.6  0.0000000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  30.43 
 
 		 217 aa  76.3  0.0000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  31.25 
 
 		 252 aa  76.3  0.0000000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  28.9 
 
 		 225 aa  75.9  0.0000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  27.22 
 
 		 216 aa  75.9  0.0000000000004  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  34.73 
 
 		 219 aa  75.9  0.0000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  33.13 
 
 		 209 aa  76.3  0.0000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  30.64 
 
 		 219 aa  75.9  0.0000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  29.45 
 
 		 216 aa  75.9  0.0000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  29.67 
 
 		 221 aa  75.5  0.0000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  34.76 
 
 		 219 aa  75.9  0.0000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  34.94 
 
 		 207 aa  75.9  0.0000000000005  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  28.65 
 
 		 223 aa  75.5  0.0000000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  28.4 
 
 		 211 aa  75.5  0.0000000000006  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.34 
 
 		 215 aa  75.1  0.0000000000007  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1951  putative nitrate/nitrite response regulator; NarL  33.14 
 
 		 213 aa  75.1  0.0000000000007  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0120802  normal  0.965323 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  32.14 
 
 		 229 aa  75.1  0.0000000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.34 
 
 		 215 aa  75.1  0.0000000000008  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  29.86 
 
 		 221 aa  75.1  0.0000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  33.52 
 
 		 216 aa  75.1  0.0000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  29.67 
 
 		 221 aa  75.1  0.0000000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.23 
 
 		 226 aa  74.7  0.0000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  33.13 
 
 		 214 aa  74.7  0.0000000000009  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  30.37 
 
 		 210 aa  73.9  0.000000000001  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  32.6 
 
 		 215 aa  74.7  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_2822  response regulator receiver protein  28.11 
 
 		 211 aa  74.3  0.000000000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.473652 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  29.34 
 
 		 219 aa  74.7  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  28.9 
 
 		 224 aa  74.3  0.000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  32.73 
 
 		 223 aa  74.3  0.000000000001  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  32.73 
 
 		 223 aa  74.3  0.000000000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  31.74 
 
 		 215 aa  74.3  0.000000000001  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  30.54 
 
 		 225 aa  74.7  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  30.6 
 
 		 223 aa  74.3  0.000000000001  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  31.33 
 
 		 212 aa  74.7  0.000000000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34.57 
 
 		 213 aa  74.3  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  30.06 
 
 		 218 aa  74.7  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_2900  transcriptional regulator NarL  33.33 
 
 		 216 aa  74.7  0.000000000001  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  32.09 
 
 		 222 aa  74.3  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  30.54 
 
 		 210 aa  73.6  0.000000000002  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal  1 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  33.97 
 
 		 223 aa  73.6  0.000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  30.67 
 
 		 211 aa  73.6  0.000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  29.67 
 
 		 217 aa  73.9  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  29.67 
 
 		 217 aa  73.9  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
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