Gene SO_3982 details

Gene Information

• Locus tag: SO_3982
• ID: 1171614
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4119636
• End bp: 4120265
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637345734
• Product: DNA-binding nitrate/nitrite response regulator
• Protein accession: NP_719512
• Protein GI: 24375469
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAC CTTATTCAGT TCTTGTGGTG GACGACCACC CACTCCTTCG TAAAGGCATT 
TGCCAACTAA TCACCTCCGA CCCCGACTTT AGTCTCTTCG GTGAAGTAGG CAGCGGTTTA 
GATGCCTTAA GCAGCGTTGC AACAGATGAA CCAGACATCG TCTTACTCGA TTTGAATATG 
AAGGGAATGA CGGGCCTAGA TACCCTCAAT GCCATGCGCC AAGAAGGCGT GACTTCACGA 
ATTGTCATCC TTACAGTTTC GGATGCAAAA CAAGATGTTA TTCGCCTTTT ACGTGCTGGG 
GCGGACGGTT ATTTACTTAA AGATACTGAA CCAGACCTCC TCCTTGATAA ACTTAAAAAT 
ACCATGTCAG GCCACAGGGT GATCAGTGAA GAAGTTGCAG AATACCTCTA TGAACTTAAA 
AATGCCGCCG ATGAGCAAGA ATGGGTTTCA AGCTTGACAC CAAGGGAGTT GCAAATCCTG 
CAACAACTGG CGGAAGGCTT AAGCAATAGA ATGATTTCAG AACACTTACA CATCAGTGAA 
GGTACAGTGA AAGTGCATGT GAAAAATCTG CTGCGTAAGG CCAATGCCAA ATCGAGAACC 
GAGATGGCGG TAAGGTATCT AAACAATTAA 

 

Protein sequence

MGKPYSVLVV DDHPLLRKGI CQLITSDPDF SLFGEVGSGL DALSSVATDE PDIVLLDLNM 
KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLDKLKN 
TMSGHRVISE EVAEYLYELK NAADEQEWVS SLTPRELQIL QQLAEGLSNR MISEHLHISE 
GTVKVHVKNL LRKANAKSRT EMAVRYLNN