| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0664 |
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| Symbol | |
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| ID | 4256195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 781479 |
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| End bp | 782150 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638121278 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_736724 |
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| Protein GI | 114046174 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.358413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGA TAAAAGTGGC AATTGCTGAT GATCATCCAT TATTTCGTAC GGCCTTAACG
CAAGCTGTTC TCAAGAATGT GAATACGGCG GATGTATTAG AAGCAGAAAA CTTTCAAGAA
TTAATTAGTA TTGTTGAAAA TAATCCTGAT ATTGAACTGA TCTTTCTCGA TTTGCATATG
CCCGGCAATG AGGGCTTTAC TGGCTTAACC CTGCTACAGA ATCATTTTCC CGATATCGCG
GTGATCATGG TGTCATCCGA TGACCAGCCC GAAATTATTC GTAAAGCCAT TAACTTTGGC
GCCAGTGCTT TTATCCCCAA ATCTGCCAGC TTAACCCAGA TCTCCACCGC CATTGCCACT
GTGCTCGAAG GGGAAGTCTG GCTTCCCGAA CACACGGATA TCAACGTCGA TCAGCAAACC
GCCGCCGAAC ATCAACGTTT AGCGAAGCAA CTGGCGCAAT TAACTCCGCA GCAGTACACA
GTGCTGGCCA GCATTGCCAA TGGACGCTTA AACAAGCAGA TAGCCTATGA TCTTGATATT
AAAGAGACGA CGGTTAAAAA ACACGTATCG GCGATATTGG TCAAACTCGA AGTCTACAAC
CGCACTCAGG CAGGCTTAGT ATTTCAACAG TTGATGATAA CCAATAACGA TAAACCCTCC
ATTAGCGCCT GA
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| Protein sequence | MSQIKVAIAD DHPLFRTALT QAVLKNVNTA DVLEAENFQE LISIVENNPD IELIFLDLHM
PGNEGFTGLT LLQNHFPDIA VIMVSSDDQP EIIRKAINFG ASAFIPKSAS LTQISTAIAT
VLEGEVWLPE HTDINVDQQT AAEHQRLAKQ LAQLTPQQYT VLASIANGRL NKQIAYDLDI
KETTVKKHVS AILVKLEVYN RTQAGLVFQQ LMITNNDKPS ISA
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