| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0829 |
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| Symbol | |
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| ID | 5661228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1028155 |
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| End bp | 1028784 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235374 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001500691 |
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| Protein GI | 157960657 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00236991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGC CCTATTCAGT TCTAGTTATT GATGATCACC CACTGCTACG CCGTGGGATC
TGTCAGCTTG TTACCTCTGA TTCTGATTTC ACCTTATTTG GAGAAGCAGG CAGTGGGTTA
GATGCGCTGT CAGCCGTTAC TGATAACGAA CCTGATATCA TACTGCTCGA TCTCAACATG
AAGGGAATGA CGGGTTTAGA CACCCTCAAT GCGCTCAGGC AGGAAGGGGT CACTTCTCGT
ATAGTGATCT TAACGGTATC TGATGCTAAG CAAGACGTGA TCCGCTTAGT CCGAGCCGGT
GCCGATGGCT ACCTACTTAA AGATACTGAG CCAGATCTAC TGCTTGAGAT GCTCAAAAAT
GCCATGTTGG GCCACAGGGT GATCAGCGAT ACCGTGCAAG AGTATTTGTC AGAACTCAAT
AGCTCGGTTA ACGAACAAGA GTGGCTCGAA AACCTCACCC CTAGAGAGCT CGAAATTCTG
CAGCACCTTG CCGAAGGTCA GAGTAATCGT ATCGTCGCTG AGCAGCTGCA CATTAGTGAA
GGCACAGTTA AAGTGCATGT GAAAAACTTA TTGCGTAAAG CCAATGCAAA GTCGCGTACA
GAGATGGCCG TTCGCTACCT AAATCAGTAA
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| Protein sequence | MGKPYSVLVI DDHPLLRRGI CQLVTSDSDF TLFGEAGSGL DALSAVTDNE PDIILLDLNM
KGMTGLDTLN ALRQEGVTSR IVILTVSDAK QDVIRLVRAG ADGYLLKDTE PDLLLEMLKN
AMLGHRVISD TVQEYLSELN SSVNEQEWLE NLTPRELEIL QHLAEGQSNR IVAEQLHISE
GTVKVHVKNL LRKANAKSRT EMAVRYLNQ
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