More than 300 homologs were found in PanDaTox collection
for query gene Tcr_0205 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007520  Tcr_0205  LuxR family transcriptional regulator  100 
 
 		 205 aa  417  1e-116  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_0795  regulatory protein LuxR  31.66 
 
 		 202 aa  93.2  2e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000492678  n/a   
 
 
-
 
NC_007948  Bpro_0302  LuxR family transcriptional regulator  34.42 
 
 		 227 aa  92.4  4e-18  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009802  CCC13826_0894  putative outer membrane component of efflux system  35.97 
 
 		 211 aa  92.4  4e-18  Campylobacter concisus 13826  Bacteria  hitchhiker  0.00401485  n/a   
 
 
-
 
NC_007908  Rfer_3768  LuxR family transcriptional regulator  32.89 
 
 		 231 aa  91.7  7e-18  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1314  transcriptional regulator, LuxR family  33.58 
 
 		 204 aa  90.1  2e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.404844  normal  1 
 
 
-
 
NC_007298  Daro_3200  LuxR family transcriptional regulator  33.33 
 
 		 205 aa  88.6  6e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.618751  normal  0.891545 
 
 
-
 
NC_009654  Mmwyl1_2822  response regulator receiver protein  33.08 
 
 		 211 aa  87  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.473652 
 
 
-
 
NC_009715  CCV52592_0166  transcriptional regulator, LuxR family protein  37.59 
 
 		 207 aa  85.5  5e-16  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00243136  n/a   
 
 
-
 
NC_011901  Tgr7_0272  two component transcriptional regulator, LuxR family  30.88 
 
 		 218 aa  80.1  0.00000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.353555  n/a   
 
 
-
 
NC_008009  Acid345_2348  two component LuxR family transcriptional regulator  33.33 
 
 		 219 aa  75.1  0.0000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.524488 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.78 
 
 		 261 aa  75.1  0.0000000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  30.34 
 
 		 220 aa  75.1  0.0000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  27.78 
 
 		 226 aa  74.3  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  32.79 
 
 		 208 aa  73.2  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  31.29 
 
 		 229 aa  70.9  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  30.56 
 
 		 216 aa  70.5  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  30.53 
 
 		 214 aa  70.5  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  29.33 
 
 		 207 aa  69.3  0.00000000003  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  32.74 
 
 		 211 aa  69.7  0.00000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  33.33 
 
 		 228 aa  69.3  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  35.25 
 
 		 229 aa  69.7  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.306134 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  25.93 
 
 		 230 aa  69.7  0.00000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  31.86 
 
 		 215 aa  69.3  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  31.58 
 
 		 219 aa  68.9  0.00000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  29.53 
 
 		 209 aa  68.9  0.00000000005  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  32.31 
 
 		 221 aa  68.6  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  31.58 
 
 		 219 aa  68.6  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  25.97 
 
 		 234 aa  68.6  0.00000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.243741 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  30.51 
 
 		 226 aa  68.2  0.00000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  30 
 
 		 218 aa  68.2  0.00000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  26.92 
 
 		 228 aa  68.2  0.00000000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  31.03 
 
 		 222 aa  68.2  0.00000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  32.46 
 
 		 211 aa  68.2  0.00000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  34.21 
 
 		 226 aa  68.2  0.00000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  31.9 
 
 		 229 aa  67.4  0.0000000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  30.43 
 
 		 219 aa  67.8  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  31.58 
 
 		 220 aa  67.8  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  32.43 
 
 		 215 aa  67.8  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.23 
 
 		 215 aa  66.6  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  32.23 
 
 		 215 aa  67  0.0000000002  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_05152  protein-glutamate methylesterase  31.67 
 
 		 222 aa  66.6  0.0000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  29.71 
 
 		 218 aa  66.6  0.0000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.23 
 
 		 215 aa  66.6  0.0000000002  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  31.09 
 
 		 228 aa  66.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_008697  Noca_4897  response regulator receiver  34.65 
 
 		 214 aa  67  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.275297  normal  0.216824 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  30.97 
 
 		 218 aa  67  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.51 
 
 		 229 aa  66.6  0.0000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.23 
 
 		 215 aa  67  0.0000000002  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  27.22 
 
 		 225 aa  66.6  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  29.29 
 
 		 217 aa  66.2  0.0000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007958  RPD_1558  response regulator receiver  25.93 
 
 		 221 aa  66.2  0.0000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  31.36 
 
 		 227 aa  66.6  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  33.33 
 
 		 241 aa  66.6  0.0000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  28.68 
 
 		 219 aa  65.9  0.0000000004  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  31.71 
 
 		 223 aa  65.9  0.0000000004  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  32.23 
 
 		 215 aa  65.9  0.0000000004  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  32.23 
 
 		 215 aa  65.9  0.0000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  32.23 
 
 		 215 aa  65.9  0.0000000004  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  29.34 
 
 		 228 aa  65.9  0.0000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  32.23 
 
 		 215 aa  65.9  0.0000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  27.87 
 
 		 212 aa  65.9  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  28.57 
 
 		 236 aa  65.9  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_02940  putative LuxR-family transcriptional regulator  33.33 
 
 		 198 aa  65.9  0.0000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.775864  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  32.23 
 
 		 215 aa  65.9  0.0000000004  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  28.8 
 
 		 206 aa  65.9  0.0000000004  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.47 
 
 		 226 aa  65.9  0.0000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29.77 
 
 		 211 aa  65.5  0.0000000005  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  30.16 
 
 		 217 aa  65.5  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  33.07 
 
 		 221 aa  65.5  0.0000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  27.56 
 
 		 207 aa  65.5  0.0000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  27.56 
 
 		 207 aa  65.5  0.0000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  31.03 
 
 		 226 aa  65.1  0.0000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.68 
 
 		 216 aa  65.1  0.0000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal  1 
 
 
-
 
NC_013037  Dfer_3572  transcriptional regulator, LuxR family  28.57 
 
 		 216 aa  65.1  0.0000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.702374 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  28.46 
 
 		 225 aa  65.1  0.0000000007  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  28.85 
 
 		 226 aa  65.1  0.0000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  28.95 
 
 		 214 aa  64.7  0.0000000008  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.7 
 
 		 221 aa  65.1  0.0000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  29.06 
 
 		 234 aa  64.7  0.0000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  30.71 
 
 		 209 aa  64.7  0.0000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  31.86 
 
 		 217 aa  64.7  0.0000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  28.78 
 
 		 221 aa  64.3  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  28.69 
 
 		 226 aa  64.7  0.000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  28.65 
 
 		 215 aa  64.7  0.000000001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.132796 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  32.54 
 
 		 208 aa  63.9  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  26.21 
 
 		 223 aa  64.7  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  28.44 
 
 		 215 aa  63.9  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  32.74 
 
 		 226 aa  64.3  0.000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.554715 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  31.58 
 
 		 221 aa  64.3  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  33.02 
 
 		 225 aa  64.3  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  32.48 
 
 		 211 aa  64.3  0.000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  33.64 
 
 		 213 aa  64.3  0.000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  30.16 
 
 		 238 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  36.04 
 
 		 201 aa  63.5  0.000000002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  29.29 
 
 		 209 aa  63.5  0.000000002  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_013037  Dfer_2086  two component transcriptional regulator, LuxR family  28.77 
 
 		 220 aa  63.5  0.000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.963114 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.82 
 
 		 239 aa  63.2  0.000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  27.43 
 
 		 220 aa  63.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  28.69 
 
 		 234 aa  63.9  0.000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
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