| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02940 |
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| Symbol | |
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| ID | 6778739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3185884 |
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| End bp | 3186480 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756389 |
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| Product | putative LuxR-family transcriptional regulator |
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| Protein accession | YP_002127230 |
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| Protein GI | 196157741 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.775864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATT TTATTGCCGA AAAAGATTTA CAAGGCGCGC TAACTCAGTA CTCATGGACA
AAATATAATA CCGTTACCAG TATTGAGTGT AAGGAAAGTG ACTGCATCTG GATATTAGCT
ACCGACGACG ACTGGCGCCA GCAACTTATC GCCGCAAAAC AGAAAGTTTC TCAGGTGGTA
TTACTTACCT ACAAGTATGA TCGTTTAGAA ATGCAGACAG CGCTGGTGCT AGGAGCAAGA
GCGTATTGCC ATGCCCTTGG CGCTGAATCT TTATTAGCAT CGGTTGCTCG CGTTATAGAA
GCCGGAGGCA TGTGGCTACC TAACGAGTTA TTGTCTGTTA CGACGTCAAA CGTTGCTTCA
AACCTCCAAA CGAAGCGAAT ACTACCAACC CTTAAAAGCC TAACAAACAG AGAAAGGGAT
GTATTAAGCT GTATCCTAGA TGGGCTTAGT AATAAGGAAA TAGCGCGGGA ACTCGGTATC
ACCGAGCGTA CCGTCAAAGA ATATGTCGGT ACGCTGCTCA ACAAATTCCA AGCTAAAGAC
AGAATTAGTC TGCTGCTTCG CTTAGGTGAG TTTAGTCATC TAAAAGATGC TCTATAA
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| Protein sequence | MRHFIAEKDL QGALTQYSWT KYNTVTSIEC KESDCIWILA TDDDWRQQLI AAKQKVSQVV
LLTYKYDRLE MQTALVLGAR AYCHALGAES LLASVARVIE AGGMWLPNEL LSVTTSNVAS
NLQTKRILPT LKSLTNRERD VLSCILDGLS NKEIARELGI TERTVKEYVG TLLNKFQAKD
RISLLLRLGE FSHLKDAL
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