Gene TDE0149 details

Gene Information

• Locus tag: TDE0149
• ID: 2740837
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 169961
• End bp: 170566
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637159019
• Product: DNA-binding response regulator
• Protein accession: NP_970766
• Protein GI: 42525668
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA TAATAGTTGA TGATGATTGT CTTGTCGTTT CCTCTTTAAA GACAATATTA 
AAAGCCAACG GATTCGATAT TATTGCAACC GGCTCAAACG GAAACGAAGC GATTACCCTC 
TTTAATGAAT ACAAACCGGA TATTCTTTTA ATGGATATCA GAATGCAAAA TATGACCGGA 
ATAGAAGCAA GCGAAAAAAT TCTAGCCGAA CATAGCGATG CAAAAATATT ATTGCTTACA 
ACCTTTAACG ATGAAGAATA TATTACAAAA GCAATTAACT TCGGATGTAA GGGTTATATA 
TTAAAACAAA ACATAGATTC TTTGGTACCT GCATTAAATG CAGTCGGCGC AGGGAGCATC 
GTATTCGATT CGGAGATAAT ATCAAAAATC CCTCAAACAA AACCTGCGCG CTCACAATTT 
AAAGAAGATT TAAACGATAG AGAAACCGAT ATTTTGGAAT TGGTTGCAGA TGGACTTAAT 
AATAAAGAAA TAGCAAACCG ACTTAGTTTG AGTGAAGGAA CTGTCCGTAA TTATGTTTCT 
TCCATACTCG AAAAACTGAA TTTAAGAGAT AGAACACAAT TAGTTGTATA TTATTACACA 
AAATAG 

 

Protein sequence

MKIIIVDDDC LVVSSLKTIL KANGFDIIAT GSNGNEAITL FNEYKPDILL MDIRMQNMTG 
IEASEKILAE HSDAKILLLT TFNDEEYITK AINFGCKGYI LKQNIDSLVP ALNAVGAGSI 
VFDSEIISKI PQTKPARSQF KEDLNDRETD ILELVADGLN NKEIANRLSL SEGTVRNYVS 
SILEKLNLRD RTQLVVYYYT K