| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3572 |
|---|
| Symbol | |
|---|
| ID | 8227157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4366448 |
|---|
| End bp | 4367098 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644931407 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003087945 |
|---|
| Protein GI | 255037324 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.702374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATT CTATTACACA CGCGTGCCTC GTTCACCCAC ACCCATTAGA GTGCGAGGCG
GTTGCTGAAT GGTTGAGGAG AAGGTCTTAC ATTGAACTGG TTGGTAAGTG TAACAATCTT
GAACAAATCA CCCAGTTACC CTACTTGAAG GACATCGACA TTGTAGTTGT ATTTGCCCAC
CACGCCGAAA AGACGGCCGA CCAGATATTA AAGGTTCGGA AACTCTATCC AAAACTAAAA
TTCCTGCTGC TCGCACCCAG CCCGTCGGGC GAATCCGTGC GCGAAGTGGT GCGCTCCGGC
GTGAGCGGCT ACATTGTTTT CGAGGCCGAG CTCGATGAAT GGGAACGTGC CATCCGGGCC
GTTTCGGAAG GGAAAGTGTA TTACGGACAG GAAGTAATGC TCAAACTGGC CGAGTCGTCG
ATGGACAAGT ACATGCAGGA ACCGGCGCCT TCCACACGTG ATTTTTTGAG TAAAAGAGAA
ATTGAAATCC TCCGGCTCGT GGCGAGCGAG TATTCTACCA ATAAAATTGC CAGCGAGCTT
TGTATCAGCG ACAAAACAGT CGAAACCCAC CGCCGTAATC TTTTTCAGAA ACTGGGTGTA
AGAAACTCCG TAGGCCTTAC CAAAATTGCT GTCCGAATGG GGGTGGTTTA A
|
|---|
| Protein sequence | MEHSITHACL VHPHPLECEA VAEWLRRRSY IELVGKCNNL EQITQLPYLK DIDIVVVFAH
HAEKTADQIL KVRKLYPKLK FLLLAPSPSG ESVREVVRSG VSGYIVFEAE LDEWERAIRA
VSEGKVYYGQ EVMLKLAESS MDKYMQEPAP STRDFLSKRE IEILRLVASE YSTNKIASEL
CISDKTVETH RRNLFQKLGV RNSVGLTKIA VRMGVV
|
|---|
| |