| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2086 |
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| Symbol | |
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| ID | 8225658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2543363 |
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| End bp | 2544025 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644929923 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003086474 |
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| Protein GI | 255035853 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.963114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACAG TTTTGCTGGT AGAGGACCAT TCCATTGTGC GAATGGGCGT CAGGTTGCTG
ATTGAAGATT TTTTGCCCTC GGTAACGGTC GTCGAGGCGG CTACTTTTAG CGAAACCCTC
AAACATCTGC AGTCGCGTTT TTTTGACCTG GTGATCCTGG ATATCAAAAT CCCGGGCGGC
GAGGCATTTA ATATGATCGG GAAGATCCGC GACATTCAGA ACAAGGTGAA AATCCTCGTT
TTTTCGTCGC AGGACGAAGA ATTGTACGCC ATACATTACG TAAAGGCGGG GGCTAACGGC
TACCTGCCCA AGGATACCTC CAACGAAGAG CTTGAAAAGG CGATCACTTC GGTACTGGCG
GGCGGTACGT ACATCAGCAA CGTGATCCAG GATCAGCTTG TAAACAACAC CCTGCTCGAA
CGGGAAAGCA AGGAAAGTCC CCTCGAAATC CTTTCCAACC GCGAACTGGA AATTATGGAC
ATGCTGCTCA CCGGCAAATG GACCAAGGAC ATTGCGCTCG ATCTGAATAT CAAGGAAAGC
ACGGTGTCAA CCTATAAAGC CCGGATTTTC GAAAAACTGG AAGTGACGAA TATCCTCGAA
CTCTTCAAAA AGGTGGAAAT TTACAAGCGG AGGAAGACGG GATCTAACGG GTCGGAGCTT
TGA
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| Protein sequence | MKTVLLVEDH SIVRMGVRLL IEDFLPSVTV VEAATFSETL KHLQSRFFDL VILDIKIPGG
EAFNMIGKIR DIQNKVKILV FSSQDEELYA IHYVKAGANG YLPKDTSNEE LEKAITSVLA
GGTYISNVIQ DQLVNNTLLE RESKESPLEI LSNRELEIMD MLLTGKWTKD IALDLNIKES
TVSTYKARIF EKLEVTNILE LFKKVEIYKR RKTGSNGSEL
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