| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1558 |
|---|
| Symbol | |
|---|
| ID | 4022038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1738068 |
|---|
| End bp | 1738733 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637961753 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_568696 |
|---|
| Protein GI | 91976037 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGG TCTCGGTTGC CCTCGTTGAT GACCATCCGT TGATGATCGA AGCGGTTTTC
TCCCTCCTTT CCCGAATTGA TTCATTTGAA GTGGTGGCGA CCGGAACCAG CGCGAAGGAC
GTGGTCGACA TCGGAACACT ACTCCGACCG GAAATCATGA TCGTCGACTT GGGGCTCCCC
GGCGACGTCT ACGCGGCGAT TGCGAGCGTC GCCTCGAACT CCTGCGGGAC CAAACTCGTC
GCCTTCACGG CTTCGACCGG CGTCGACACC GCCATTCGCG CCCTCGACAG CGGGGCGAGC
GGATACGTGC TCAAAGGTAG CAGCCCGGAT GAGCTGCTGG ATGCGATCGC CTCGGTGCGG
TCCGGGGAAA CCTACATCAC GCGCAACTTC GCCACCCAAG TGATCTCGGC GCTGCGCGAT
GCGACTATCC GGCGCCGTGC CGCCATGGCG GTCAAGCTGA GCATCCGCGA GGAACAGATC
GTGCGGCTGT TGCTGAAGGG CAAGACCAAC AAGGAAATCG CCCACGCGAT CAGTATCAGC
GAGAAGACGG TCAAGCACTA CATGACGATC CTCATGCAGA AGTTGCAGGT GCGCAATCGG
CTCGAGGTCG TGATCGCCGC GCAGAGGCTG GATGCAGAGC GGCAACTTCC TCGGCTGCAT
TCATGA
|
|---|
| Protein sequence | MSRVSVALVD DHPLMIEAVF SLLSRIDSFE VVATGTSAKD VVDIGTLLRP EIMIVDLGLP
GDVYAAIASV ASNSCGTKLV AFTASTGVDT AIRALDSGAS GYVLKGSSPD ELLDAIASVR
SGETYITRNF ATQVISALRD ATIRRRAAMA VKLSIREEQI VRLLLKGKTN KEIAHAISIS
EKTVKHYMTI LMQKLQVRNR LEVVIAAQRL DAERQLPRLH S
|
|---|
| |