More than 300 homologs were found in PanDaTox collection
for query gene Rcas_1355 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  100 
 
 
230 aa  454  1e-127  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  86.61 
 
 
226 aa  373  1e-102  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  52.25 
 
 
229 aa  226  2e-58  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  49.77 
 
 
232 aa  195  5.000000000000001e-49  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  46.67 
 
 
220 aa  181  9.000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  43.64 
 
 
222 aa  179  2.9999999999999997e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  42.33 
 
 
218 aa  179  4e-44  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  43.18 
 
 
222 aa  178  5.999999999999999e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.67 
 
 
226 aa  178  5.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  43.06 
 
 
213 aa  174  9e-43  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5384  two component response regulator  45.71 
 
 
216 aa  174  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  44.23 
 
 
222 aa  173  1.9999999999999998e-42  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  47.91 
 
 
216 aa  172  2.9999999999999996e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.2 
 
 
239 aa  172  2.9999999999999996e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  47.17 
 
 
219 aa  172  3.9999999999999995e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  48.18 
 
 
221 aa  170  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  38.57 
 
 
228 aa  169  3e-41  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  44.39 
 
 
209 aa  169  4e-41  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  44.98 
 
 
217 aa  169  4e-41  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_012803  Mlut_02970  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.34 
 
 
227 aa  168  7e-41  Micrococcus luteus NCTC 2665  Bacteria  normal  0.611463  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  43.05 
 
 
225 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  45.45 
 
 
222 aa  167  1e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.85 
 
 
236 aa  166  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  43.13 
 
 
210 aa  167  2e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  40.57 
 
 
216 aa  166  2e-40  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  47.25 
 
 
219 aa  166  2e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  45 
 
 
222 aa  166  2.9999999999999998e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  44.19 
 
 
217 aa  165  5e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  43.44 
 
 
223 aa  165  5e-40  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  45.33 
 
 
212 aa  165  5.9999999999999996e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  44.13 
 
 
228 aa  165  6.9999999999999995e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  40 
 
 
231 aa  164  1.0000000000000001e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  44.74 
 
 
227 aa  164  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  47.64 
 
 
234 aa  163  2.0000000000000002e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  45.61 
 
 
227 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  45.07 
 
 
219 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  41.9 
 
 
218 aa  162  4.0000000000000004e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  43.75 
 
 
218 aa  162  6e-39  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  40.85 
 
 
230 aa  161  6e-39  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  44.29 
 
 
230 aa  162  6e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  46.5 
 
 
208 aa  161  7e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.47 
 
 
221 aa  161  7e-39  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  43.06 
 
 
219 aa  161  8.000000000000001e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  42.42 
 
 
231 aa  161  8.000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  41.83 
 
 
213 aa  161  8.000000000000001e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  44.06 
 
 
211 aa  160  1e-38  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  41.59 
 
 
215 aa  160  2e-38  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  43.78 
 
 
212 aa  160  2e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  41.36 
 
 
226 aa  160  2e-38  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  42.52 
 
 
215 aa  160  2e-38  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  42.52 
 
 
215 aa  159  4e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  40 
 
 
215 aa  159  4e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  40 
 
 
215 aa  159  4e-38  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  40 
 
 
215 aa  159  4e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  43.87 
 
 
221 aa  159  5e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  40.09 
 
 
224 aa  159  5e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  41.4 
 
 
215 aa  159  5e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  42.52 
 
 
215 aa  158  6e-38  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  42.52 
 
 
215 aa  158  6e-38  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  42.52 
 
 
215 aa  158  6e-38  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  41.94 
 
 
225 aa  158  6e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  42.52 
 
 
215 aa  158  6e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  42.52 
 
 
215 aa  158  6e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  46.08 
 
 
214 aa  158  6e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  42.04 
 
 
228 aa  158  6e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  39.52 
 
 
209 aa  158  7e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  45.12 
 
 
221 aa  158  7e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  41.83 
 
 
209 aa  158  7e-38  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  41.67 
 
 
218 aa  158  7e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  44.29 
 
 
224 aa  158  8e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  41.59 
 
 
215 aa  158  9e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.24 
 
 
218 aa  157  9e-38  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  44.39 
 
 
220 aa  157  9e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  42.04 
 
 
226 aa  157  1e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  44.14 
 
 
226 aa  157  1e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  38.29 
 
 
223 aa  157  1e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  45.79 
 
 
214 aa  157  1e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  43.38 
 
 
224 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  45.5 
 
 
225 aa  157  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  41.67 
 
 
239 aa  157  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  40.48 
 
 
211 aa  157  2e-37  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  42.33 
 
 
209 aa  156  2e-37  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  46.36 
 
 
224 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  43.52 
 
 
224 aa  156  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  39.42 
 
 
213 aa  156  2e-37  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  41.23 
 
 
212 aa  156  2e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  41.31 
 
 
216 aa  157  2e-37  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  42.55 
 
 
239 aa  156  3e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  39.42 
 
 
213 aa  156  3e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  43.93 
 
 
219 aa  156  3e-37  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  40.87 
 
 
209 aa  155  5.0000000000000005e-37  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  40.87 
 
 
209 aa  155  5.0000000000000005e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  40.87 
 
 
209 aa  155  5.0000000000000005e-37  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  40.87 
 
 
209 aa  155  5.0000000000000005e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  42.92 
 
 
219 aa  155  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  40.87 
 
 
209 aa  155  5.0000000000000005e-37  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  42.99 
 
 
237 aa  155  5.0000000000000005e-37  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  41.59 
 
 
220 aa  155  6e-37  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  43.54 
 
 
234 aa  155  7e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  42.65 
 
 
215 aa  155  7e-37  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
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