More than 300 homologs were found in PanDaTox collection
for query gene BBta_0852 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  100 
 
 		 224 aa  447  1e-125  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  82.03 
 
 		 223 aa  354  5e-97  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  83.03 
 
 		 224 aa  352  2e-96  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  82.49 
 
 		 224 aa  348  3e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  80.73 
 
 		 225 aa  347  9e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  78.83 
 
 		 231 aa  339  2e-92  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  66.04 
 
 		 221 aa  284  8e-76  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  66.04 
 
 		 221 aa  281  5.000000000000001e-75  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  64.06 
 
 		 224 aa  281  7.000000000000001e-75  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  59.62 
 
 		 215 aa  243  1.9999999999999999e-63  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_011989  Avi_0584  two component response regulator  56.73 
 
 		 215 aa  230  1e-59  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  57.84 
 
 		 215 aa  230  1e-59  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  54.63 
 
 		 220 aa  230  1e-59  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  53.77 
 
 		 219 aa  228  4e-59  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  53.3 
 
 		 220 aa  227  1e-58  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  52.83 
 
 		 220 aa  226  2e-58  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  56.34 
 
 		 214 aa  226  2e-58  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  56.37 
 
 		 216 aa  225  3e-58  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  51.89 
 
 		 219 aa  224  6e-58  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  51.89 
 
 		 220 aa  224  8e-58  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  52.83 
 
 		 238 aa  224  8e-58  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  53.37 
 
 		 221 aa  224  9e-58  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  51.89 
 
 		 220 aa  224  1e-57  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  56.37 
 
 		 216 aa  224  1e-57  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  51.89 
 
 		 220 aa  224  1e-57  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  56.37 
 
 		 216 aa  224  1e-57  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  56.37 
 
 		 216 aa  223  2e-57  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  51.42 
 
 		 220 aa  222  4e-57  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  50.94 
 
 		 220 aa  222  4e-57  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  50.94 
 
 		 220 aa  220  9.999999999999999e-57  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  57.28 
 
 		 213 aa  219  1.9999999999999999e-56  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  50.94 
 
 		 220 aa  219  1.9999999999999999e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  50.94 
 
 		 219 aa  218  7e-56  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  53.92 
 
 		 215 aa  217  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  51.42 
 
 		 219 aa  217  1e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  50.94 
 
 		 220 aa  217  1e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  55.17 
 
 		 215 aa  216  2e-55  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  56.8 
 
 		 213 aa  216  2e-55  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  57.84 
 
 		 215 aa  215  4e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.463895 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  55.17 
 
 		 215 aa  214  7e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  55.39 
 
 		 216 aa  214  9e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  52.66 
 
 		 221 aa  213  2.9999999999999995e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  53.43 
 
 		 217 aa  211  1e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  53.43 
 
 		 217 aa  211  1e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  52.66 
 
 		 222 aa  209  2e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  53.69 
 
 		 215 aa  209  3e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  55.4 
 
 		 218 aa  208  5e-53  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  51.71 
 
 		 209 aa  201  9e-51  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  50.72 
 
 		 251 aa  197  9e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  49.28 
 
 		 251 aa  194  1e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  48.24 
 
 		 218 aa  192  3e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  48.74 
 
 		 210 aa  191  5e-48  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  54.63 
 
 		 211 aa  192  5e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  49.28 
 
 		 219 aa  191  9e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  48.73 
 
 		 223 aa  189  2e-47  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  48.24 
 
 		 210 aa  189  2.9999999999999997e-47  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  48.73 
 
 		 223 aa  189  4e-47  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  53.17 
 
 		 209 aa  187  8e-47  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  48.73 
 
 		 223 aa  187  1e-46  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  47.72 
 
 		 223 aa  187  2e-46  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  51.26 
 
 		 209 aa  186  3e-46  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  44.44 
 
 		 213 aa  185  4e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  50.25 
 
 		 216 aa  184  8e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  46.19 
 
 		 227 aa  184  8e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  49.75 
 
 		 214 aa  182  4.0000000000000006e-45  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  49.75 
 
 		 214 aa  182  4.0000000000000006e-45  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  48.78 
 
 		 219 aa  180  1e-44  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  44.55 
 
 		 222 aa  179  2e-44  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  48.74 
 
 		 229 aa  178  5.999999999999999e-44  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.190475 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  42.72 
 
 		 223 aa  175  4e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  46.53 
 
 		 216 aa  175  5e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  45.41 
 
 		 211 aa  175  6e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  45.85 
 
 		 222 aa  174  9.999999999999999e-43  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  42.93 
 
 		 212 aa  174  9.999999999999999e-43  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  45.63 
 
 		 241 aa  172  2.9999999999999996e-42  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  44.02 
 
 		 252 aa  170  2e-41  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  41.04 
 
 		 224 aa  165  5e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  43.9 
 
 		 220 aa  164  6.9999999999999995e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  43.2 
 
 		 219 aa  164  8e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  43.33 
 
 		 221 aa  163  2.0000000000000002e-39  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  45.67 
 
 		 244 aa  163  2.0000000000000002e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  45.67 
 
 		 244 aa  163  2.0000000000000002e-39  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.89842 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  44.17 
 
 		 217 aa  162  5.0000000000000005e-39  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  42.51 
 
 		 214 aa  162  5.0000000000000005e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_003910  CPS_3420  LuxR family DNA-binding response regulator  43.22 
 
 		 216 aa  161  9e-39  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  38.21 
 
 		 218 aa  158  6e-38  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  37.85 
 
 		 219 aa  151  8.999999999999999e-36  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  40.1 
 
 		 218 aa  144  8.000000000000001e-34  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  39.53 
 
 		 221 aa  144  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  41.71 
 
 		 209 aa  142  5e-33  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  38.6 
 
 		 221 aa  141  8e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  39.81 
 
 		 221 aa  140  9.999999999999999e-33  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  40.28 
 
 		 221 aa  140  9.999999999999999e-33  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  40.33 
 
 		 248 aa  140  9.999999999999999e-33  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_3305  LuxR family DNA-binding response regulator  38.92 
 
 		 206 aa  140  1.9999999999999998e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  38.6 
 
 		 221 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  40.58 
 
 		 216 aa  139  1.9999999999999998e-32  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  39.35 
 
 		 221 aa  139  4.999999999999999e-32  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  34.33 
 
 		 229 aa  136  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  40 
 
 		 226 aa  135  7.000000000000001e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
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