| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0656 |
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| Symbol | |
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| ID | 4476866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 775653 |
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| End bp | 776282 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725191 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_868300 |
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| Protein GI | 117919108 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000830399 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.140804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAC CTTATTCAGT CCTCGTGGTC GATGACCATC CCCTCCTACG TAAAGGGATC
TGCCAACTGA TCGCCTCCGA TCCAGATTTT AGTCTCTTCG GCGAAGTCGG CGGAGGCTTA
GATGCCTTAA GCGCCGTTGC CACCGATGAG CCCGATATTG TACTGCTGGA TCTGAATATG
AAGGGAATGA CAGGACTCGA TACCCTCAAT GCCATGCGCC AGGAAGGCGT GACCTCACGG
ATAGTAATCC TCACAGTGTC GGATGCCAAA CAAGATGTTA TTCGACTGCT ACGCGCGGGC
GCCGACGGAT ATTTGCTTAA AGATACCGAG CCGGATCTGC TGCTCGATAA GCTCAAAAAT
GCCATGTTGG GCCACAGAGT GATCAGCGAT GAAGTTGAAG AATATCTGTA CGAGCTTAAA
AATGCCGCCG ATGAGCAGGA ATGGATTTCA AGCCTCACGC CAAGGGAACT ACAGATCCTG
CAACAGCTGG CAGAAGGGTT AAGTAACCGG ATGATTTCAG AGCACTTACA TATCAGTGAA
GGCACGGTAA AAGTACACGT TAAAAATCTG CTGCGTAAGG CCAATGCCAA GTCGAGAACC
GAAATGGCGG TAAGGTATCT GAACAACTAA
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| Protein sequence | MGKPYSVLVV DDHPLLRKGI CQLIASDPDF SLFGEVGGGL DALSAVATDE PDIVLLDLNM
KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLDKLKN
AMLGHRVISD EVEEYLYELK NAADEQEWIS SLTPRELQIL QQLAEGLSNR MISEHLHISE
GTVKVHVKNL LRKANAKSRT EMAVRYLNN
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