| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3713 |
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| Symbol | |
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| ID | 5372153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4409717 |
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| End bp | 4410346 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831970 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001367900 |
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| Protein GI | 153002219 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000161759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAC CTTATTCCGT ACTGGTGGTC GATGACCATC CCCTGTTACG CAAAGGCATC
TGCCAGCTCA TTGCCTCAGA TCCTGATTTC AGCCTTTTTG GTGAAGCTGG TGGCGGTTTA
GACGCATTAA CCGCCGTCGC CACCGATGAA CCCGACATCA TTTTGCTCGA TCTGAATATG
AAAGGTATGA CGGGCCTAGA TACCCTCAAT GCCATGCGCC AAGAGGGCGT CACCTCGCGC
ATAGTGATAC TCACAGTTTC CGATGCCAAA CAGGATGTGA TCCGCTTATT ACGCGCAGGA
GCCGACGGCT ATTTGCTCAA AGATACTGAG CCCGATTTAC TGCTCGAAAA GCTCAAAAAT
GCCATGCTTG GCCACAGAGT TATCAGTGAT GAAGTGGAGG AATACCTCTA CGAGCTAAAA
GATGCGACCG ATGAGCAAGA ATGGATTTCG AGTTTGACGC CAAGGGAGCT ACAAATTCTT
GAGCAACTGG CGGAAGGCTT AAGTAATAGG ATGATTTCAG AGCATTTACA CATTAGTGAA
GGCACAGTCA AAGTGCATGT GAAAAACCTA CTGCGTAAAG CTAATGCCAA GTCGAGAACC
GAAATGGCGG TACGCTACCT TAATCAGTAA
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| Protein sequence | MGKPYSVLVV DDHPLLRKGI CQLIASDPDF SLFGEAGGGL DALTAVATDE PDIILLDLNM
KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLEKLKN
AMLGHRVISD EVEEYLYELK DATDEQEWIS SLTPRELQIL EQLAEGLSNR MISEHLHISE
GTVKVHVKNL LRKANAKSRT EMAVRYLNQ
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