| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4024 |
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| Symbol | |
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| ID | 6112993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4449370 |
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| End bp | 4450020 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623818 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001750873 |
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| Protein GI | 170723185 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000136895 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATGT ACGAAATCCT GATTGCCGAT GACCACCCGC TGTTTCGTAG CGCTCTGCGC
CAGGCCGTCA CCCTTGGCCT GGGCGCGGAT GTGCGCCTGG TCGAGGTGGC GAGCATCGCC
GAGCTGGAAA GCCGACTGAG CGAAAAAGCC GACTGGGACC TGGTCCTGCT GGACCTGAAC
ATGCCGGGCG CCTACGGTTT CTCCGGGCTG GTCCTGCTCC GTGGTCAGTA CCCCCAGATC
CCGGTGGTTA TGGTCTCTGC CCAGGAAGAG GCTGCCGTTG TAGTCAAGTC CCGTGAGTTC
GGGGCCAGTG GTTTCATTCC AAAGTCCAGT GGGCTGGAAG TGATTCAGGA TGCAGTGAGG
AAGGTGCTCG ATGGCGACGT CTGGTGGCCG CCTCAGGCAT TTGAAAGGGT CGATGTCTCG
GCCGAGGCCA AAGCCGCCAG CGAAGGCCTG GCCAGTCTCA CGCCACAGCA GTTTCGCGTG
CTGACCATGG TCTGCGAGGG CTTGCTGAAC AAACAGATCG CCTATGAGCT GAATGTGTCG
GAAGCGACCA TCAAGGCCCA TGTGACGGCC ATTTTCCGCA AGCTGGGTGT ACGCACTCGT
ACCCAGGCGG CCTTGTTGCT GCAACAACTT GAATCCGTTG CGAGCAGCTA A
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| Protein sequence | MAMYEILIAD DHPLFRSALR QAVTLGLGAD VRLVEVASIA ELESRLSEKA DWDLVLLDLN
MPGAYGFSGL VLLRGQYPQI PVVMVSAQEE AAVVVKSREF GASGFIPKSS GLEVIQDAVR
KVLDGDVWWP PQAFERVDVS AEAKAASEGL ASLTPQQFRV LTMVCEGLLN KQIAYELNVS
EATIKAHVTA IFRKLGVRTR TQAALLLQQL ESVASS
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