| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0970 |
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| Symbol | |
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| ID | 6115204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1281528 |
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| End bp | 1282157 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632453 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001759358 |
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| Protein GI | 170725332 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0307407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGAAGC CATATTCAGT TCTCGTTGTC GATGATCATC CACTATTACG CCGTGGGATC
TGCCAATTAA TTACTTCAGA TTCAGATTTT ACTCTTTTTG GTGAAGCAGG TAGCGGCCTA
GATGCCTTAT CAGCCATTGA AGACAATGAG CCAGATATCA TTCTGTTAGA TCTAAATATG
AAAGGGATGA CAGGATTAGA CACTCTAAAT GCATTACGCC AAGAAGGGGT GACATCACGT
ATCGTGATCT TAACGGTTTC TGATGCCAAA CAAGATGTTA TTCGTATTAT TCGTGCTGGT
GCCGATGGTT ACCTGTTGAA AGACACGGAG CCAGACTTAC TACTTGAAAA GCTCAAAAAT
GCCATGCAGG GACATAGAGT GATCAGTGAA TCTGTTGAGG AGTATCTTTA TGAACTTAAA
GATGCCGCCG ATGAGGATGA CTGGCTCAGT AACTTAACTC CTAGAGAGCT ACAGATCTTA
GAACAGGTTG CCGAAGGGAA GAGCAACAGA ATGATCTCTG AGCTACTGCA CATTAGCGAA
GGGACAGTAA AAGTGCATGT GAAAAATCTA TTGAGAAAAG GTCATGCCAA ATCAAGAACC
GAGATGGCAG TTCGTTACCT AAATCAGTAA
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| Protein sequence | MGKPYSVLVV DDHPLLRRGI CQLITSDSDF TLFGEAGSGL DALSAIEDNE PDIILLDLNM
KGMTGLDTLN ALRQEGVTSR IVILTVSDAK QDVIRIIRAG ADGYLLKDTE PDLLLEKLKN
AMQGHRVISE SVEEYLYELK DAADEDDWLS NLTPRELQIL EQVAEGKSNR MISELLHISE
GTVKVHVKNL LRKGHAKSRT EMAVRYLNQ
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