| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0657 |
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| Symbol | |
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| ID | 4251588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 765165 |
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| End bp | 765794 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117220 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_732794 |
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| Protein GI | 113969001 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000493749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.229808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGC CTTATTCAGT CCTAGTGGTC GATGACCATC CTCTTCTTCG CAAAGGGATC
TGCCAACTGA TCGCATCCGA TCCTGACTTT AGTCTCTTCG GTGAAGTGGG CGGTGGCTTA
GATGCCTTAA GCGCCGTAGC CACCGATGAG CCCGATATTG TACTGCTCGA TCTGAATATG
AAGGGAATGA CTGGGCTCGA TACCCTCAAT GCCATGCGCC AGGAAGGCGT GACATCAAGG
ATAGTGATCC TCACCGTTTC CGATGCAAAA CAAGATGTTA TTCGACTACT GCGCGCGGGC
GCCGATGGTT ATTTACTGAA AGATACCGAA CCGGATCTGC TGCTCGATAA GCTCAAAAAT
GCCATGTTGG GCCACAGAGT GATCAGCGAC GAAGTCGAAG AATATCTGTA CGAGCTTAAA
AATGCCGCCG ATGAACAGGA ATGGATCTCA AGCCTCACAC CAAGGGAGCT ACAGATCCTG
CAACAACTGG CGGAAGGGTT AAGCAACCGG ATGATTTCAG AGCACTTACA TATCAGTGAA
GGCACAGTAA AAGTACACGT GAAAAATCTG CTGCGTAAGG CCAATGCTAA ATCGAGAACC
GAAATGGCAG TAAGGTATCT GAATAACTAA
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| Protein sequence | MGKPYSVLVV DDHPLLRKGI CQLIASDPDF SLFGEVGGGL DALSAVATDE PDIVLLDLNM
KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLDKLKN
AMLGHRVISD EVEEYLYELK NAADEQEWIS SLTPRELQIL QQLAEGLSNR MISEHLHISE
GTVKVHVKNL LRKANAKSRT EMAVRYLNN
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