Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3836 |
Symbol | |
ID | 5755651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4517792 |
End bp | 4518421 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641290178 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001556256 |
Protein GI | 160876940 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000136397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0231387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAC CTTATTCCGT ACTGGTGGTC GATGACCATC CCCTGTTACG CAAAGGCATC TGCCAGCTCA TTGCCTCAGA TCCTGATTTC AGCCTTTTTG GTGAAGCTGG TGGCGGTTTA GACGCATTAA CCGCCGTCGC CACCGATGAA CCCGACATCA TTTTGCTCGA TCTGAATATG AAAGGTATGA CGGGCCTAGA TACCCTCAAT GCCATGCGCC AAGAGGGCGT CACCTCGCGC ATAGTGATAC TCACAGTTTC CGATGCCAAA CAGGATGTGA TCCGCTTATT ACGCGCAGGA GCCGACGGCT ATTTGCTCAA AGATACTGAG CCCGATTTAC TGCTCGAAAA GCTCAAAAAT GCCATGCTTG GCCACAGAGT TATCAGTGAT GAAGTGGAGG AATACCTCTA CGAGCTAAAA GATGCGACCG ATGAGCAAGA ATGGATTTCG AGCTTGACGC CAAGGGAGCT GCAAATTCTA GAGCAACTGG CGGAAGGCTT AAGTAATCGG ATGATTTCAG AGCATTTACA CATTAGTGAA GGCACAGTCA AAGTGCATGT GAAAAACCTA CTGCGTAAAG CTAATGCCAA GTCGAGAACC GAAATGGCGG TACGCTACCT TAATCAGTAA
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Protein sequence | MGKPYSVLVV DDHPLLRKGI CQLIASDPDF SLFGEAGGGL DALTAVATDE PDIILLDLNM KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLEKLKN AMLGHRVISD EVEEYLYELK DATDEQEWIS SLTPRELQIL EQLAEGLSNR MISEHLHISE GTVKVHVKNL LRKANAKSRT EMAVRYLNQ
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