| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3459 |
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| Symbol | |
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| ID | 4476802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4146224 |
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| End bp | 4146895 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639728068 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_871088 |
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| Protein GI | 117921896 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.306063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.532773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAGA TAAAAGTCGC CATTGCTGAT GATCATCCAT TATTTCGTAC AGCCTTAACA
CAAGCTGTTC TCAAGAATGT GAATACGGCG GAAGTATTGG AAGCGGAAAA CTTTCAAGAA
TTAATTACGC TCGTTGAGAA TAATCCTGAT ATTGAACTTA TCTTTCTCGA TTTACATATG
CCCGGCAATG AGGGCTTTAC CGGCTTAACC CTACTACAGA ATCATTTTCC CGATATCGCG
GTGATCATGG TGTCCTCCGA TGATCAGCCC GAGATTATCC GTAAGGCCAT TAACTTTGGC
GCCAGTGCGT TTATCCCCAA ATCCGCCAGC TTAACCCAGA TCTCCACCGC GATTGCCACA
GTGCTCGAAG GGGAAGTCTG GCTACCGGAA CACACGGATA TCAATGTCGA TCAGCAAACC
GCTGCCGAGC ATCAACGTTT AGCGAAGCAA CTGGCACAAT TAACCCCGCA GCAGTACACA
GTGCTGGCCA GCATTGCCAA TGGACGCTTA AACAAGCAGA TCGCCTATGA TCTTGATATT
AAAGAGACCA CGGTAAAAAA ACACGTATCG GCGATACTGG TTAAACTCGA AGTCTACAAC
CGCACTCAAG CGGGCTTAGT CTTTCAACAA TTGATGATAA CCAGCAACGA TAAACCGCCG
ATCAGCGCCT AA
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| Protein sequence | MSQIKVAIAD DHPLFRTALT QAVLKNVNTA EVLEAENFQE LITLVENNPD IELIFLDLHM
PGNEGFTGLT LLQNHFPDIA VIMVSSDDQP EIIRKAINFG ASAFIPKSAS LTQISTAIAT
VLEGEVWLPE HTDINVDQQT AAEHQRLAKQ LAQLTPQQYT VLASIANGRL NKQIAYDLDI
KETTVKKHVS AILVKLEVYN RTQAGLVFQQ LMITSNDKPP ISA
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