Gene Acid345_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3502 
Symbol 
ID4072761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4132464 
End bp4133150 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content59% 
IMG OID637985525 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_592577 
Protein GI94970529 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAG CAAAGGCAAC AAATGCCCGC GGTATAGCTC GCATACTGAT TGCGGATGAT 
GATCCAATCG TCCGGGACAT CCTGCGCAAC GTGCTTTCCG CACGCACGGA ATTTTCAGTC
GTCGGTGAAG CCAAGAACGG CGACGAGAGT GTTCGACTCG TCCGTGAACT CAAGCCGGAC
CTCCTGTTGC TCGACTTACT GATGCCGAAT CTCCCGGGAC TCGATGCCCT CAAGGAGATG
ACGACTACCG ACAGCCTGGT ACGGACGATC GTACTCACGG CGTCCATCAC CAAGCAGCAG
GTGCTGCAGG CGTTGCAATT GGGGGCGCGT GGTGTCGTTC GCAAGGACGC GCTGAACGAA
CTGGTGGCCG CAATCCGCGC GGTACTCGAT GGCCAGTACT GGCTCGACGG CAAGATCGTG
CCGAACGTCG TGCAATTGCT GAATGAGTTG GCCGCCAGCA GCCGTACGGA AGCCCCGCGA
AACGATTTTG GCCTCACGCC GCGCGAACTC GAGATTGTTG CGCTGGTGAC GGAAGGTTGC
GGGAATCGCG AAATTGCTAC TCGCCTGACC ATCAGCGAAG AAACTGTAAA GCGGCACCTG
ACGCATATCT TCGACAAAGT GGGCATGTCG ACGCGGTTGG AGTTGGCGCT GTTCGCGCTG
GACCACAACC TGGCGCGTCG CGCGTAG
 
Protein sequence
MAQAKATNAR GIARILIADD DPIVRDILRN VLSARTEFSV VGEAKNGDES VRLVRELKPD 
LLLLDLLMPN LPGLDALKEM TTTDSLVRTI VLTASITKQQ VLQALQLGAR GVVRKDALNE
LVAAIRAVLD GQYWLDGKIV PNVVQLLNEL AASSRTEAPR NDFGLTPREL EIVALVTEGC
GNREIATRLT ISEETVKRHL THIFDKVGMS TRLELALFAL DHNLARRA