Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3502 |
Symbol | |
ID | 4072761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4132464 |
End bp | 4133150 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985525 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_592577 |
Protein GI | 94970529 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAAG CAAAGGCAAC AAATGCCCGC GGTATAGCTC GCATACTGAT TGCGGATGAT GATCCAATCG TCCGGGACAT CCTGCGCAAC GTGCTTTCCG CACGCACGGA ATTTTCAGTC GTCGGTGAAG CCAAGAACGG CGACGAGAGT GTTCGACTCG TCCGTGAACT CAAGCCGGAC CTCCTGTTGC TCGACTTACT GATGCCGAAT CTCCCGGGAC TCGATGCCCT CAAGGAGATG ACGACTACCG ACAGCCTGGT ACGGACGATC GTACTCACGG CGTCCATCAC CAAGCAGCAG GTGCTGCAGG CGTTGCAATT GGGGGCGCGT GGTGTCGTTC GCAAGGACGC GCTGAACGAA CTGGTGGCCG CAATCCGCGC GGTACTCGAT GGCCAGTACT GGCTCGACGG CAAGATCGTG CCGAACGTCG TGCAATTGCT GAATGAGTTG GCCGCCAGCA GCCGTACGGA AGCCCCGCGA AACGATTTTG GCCTCACGCC GCGCGAACTC GAGATTGTTG CGCTGGTGAC GGAAGGTTGC GGGAATCGCG AAATTGCTAC TCGCCTGACC ATCAGCGAAG AAACTGTAAA GCGGCACCTG ACGCATATCT TCGACAAAGT GGGCATGTCG ACGCGGTTGG AGTTGGCGCT GTTCGCGCTG GACCACAACC TGGCGCGTCG CGCGTAG
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Protein sequence | MAQAKATNAR GIARILIADD DPIVRDILRN VLSARTEFSV VGEAKNGDES VRLVRELKPD LLLLDLLMPN LPGLDALKEM TTTDSLVRTI VLTASITKQQ VLQALQLGAR GVVRKDALNE LVAAIRAVLD GQYWLDGKIV PNVVQLLNEL AASSRTEAPR NDFGLTPREL EIVALVTEGC GNREIATRLT ISEETVKRHL THIFDKVGMS TRLELALFAL DHNLARRA
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