| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0287 |
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| Symbol | |
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| ID | 5134726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 322932 |
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| End bp | 323606 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640530610 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001215128 |
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| Protein GI | 147672305 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.1053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG AAAACAAACT AAACGTTAGA ATGCTTTCTG ATGTTTGCAT GCAATCCAGA
TTGTTGAAAG AGGCGTTAGA ATCAAAACTT CCTTTGGCGC TGGAAATTAC ACCATTTTCT
GAGCTCTGGC TTGAAGAGAA TAAACCAGAA AGTCGCAGTA TTCAGATGCT GGTGATTGAT
TATTCTAGAA TTTCTGATGA TGTTTTGACC GATTACAGCT CGTTTAAGCA CATCAGTTGT
CCTGATGCGA AAGAGGTCAT CATAAACTGT CCGCAGGATA TTGAGCATAA GCTGCTCTTT
AAGTGGAATA ATTTGGCTGG AGTATTTTAT ATTGATGATG ATATGGATAC CCTGATCAAA
GGCATGAGTA AAATTTTGCA AGATGAAATG TGGTTAACGC GTAAACTGGC CCAAGAATAC
ATTCTCCATT ATCGTGCCGG TAACTCAGTC GTGACCTCAC AAATGTACGC AAAATTAACC
AAAAGAGAAC AACAGATTAT CAAGTTACTT GGTAGTGGTG CTTCTAATAT TGAAATTGCA
GATAAACTCT TTGTGAGTGA AAATACAGTA AAAACACATC TGCATAATGT CTTTAAGAAA
ATTAATGCCA AAAATCGCTT GCAGGCACTG ATTTGGGCGA AAAATAATAT TGGAATTGAG
GAAGTCAATT CTTAA
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| Protein sequence | MKDENKLNVR MLSDVCMQSR LLKEALESKL PLALEITPFS ELWLEENKPE SRSIQMLVID
YSRISDDVLT DYSSFKHISC PDAKEVIINC PQDIEHKLLF KWNNLAGVFY IDDDMDTLIK
GMSKILQDEM WLTRKLAQEY ILHYRAGNSV VTSQMYAKLT KREQQIIKLL GSGASNIEIA
DKLFVSENTV KTHLHNVFKK INAKNRLQAL IWAKNNIGIE EVNS
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