| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0633 |
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| Symbol | |
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| ID | 5661033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 784084 |
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| End bp | 784758 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235179 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001500496 |
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| Protein GI | 157960462 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA TTGATGAGGT TATCTTTCTT CATCAGGTGG CATCTCCTTG CCACTTAGCT
ATTCTTGCGG AGTCAATTGG ACTGAAAACG CAGGTTATCT CTAACGTAGA ACAGCTTGAC
CCCAATAGTC ACAGTAACTG CTTTTATCTT GTCTCTCAGC AAGGTGCAGC ACTGGATATT
AATGGTATTC CGCTGGTGGC GAGTCAATTA GTTAAGCATG TTCCTGTGGC GCTTTATCAA
GTCGAACGTG AAGGTCTATC TGCAGAAGCC GCGCTGCTTC AGGGGATCCG TGGTCTACTG
TTTAATAACG AGCGTATGGA TCTGCTACTA ACGGGATTAC GTAAGATGCT TAGCGATGAG
CTATGGTTCG ACAGACCATT AATGAGCAAA GTATTGCGCC AACTTGTCAA TAAGATGGGC
ATTTCTGAAT CTTTAACAAG TGAGGCCTCC GAATCACTCG AGGGACTAAC CAATCGTGAG
AAAACCATCA TTCAATTGGT GTCCAGTGGC GCACGTAACA AAGAGATAGC CGATAAGCTG
TGTATTAGTG AGCATACGGT AAAGGCGCAT ATTTCCTCTA TATTCAGAAA AACCCAAGCC
AGAAACCGTG TAGAACTATT GCGCTGGGCA CAGTCATTTG AAAGCCAACT TAATTTATAT
GAATTAAGTC ACTAA
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| Protein sequence | MSKIDEVIFL HQVASPCHLA ILAESIGLKT QVISNVEQLD PNSHSNCFYL VSQQGAALDI
NGIPLVASQL VKHVPVALYQ VEREGLSAEA ALLQGIRGLL FNNERMDLLL TGLRKMLSDE
LWFDRPLMSK VLRQLVNKMG ISESLTSEAS ESLEGLTNRE KTIIQLVSSG ARNKEIADKL
CISEHTVKAH ISSIFRKTQA RNRVELLRWA QSFESQLNLY ELSH
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