Gene VEA_001276 details

Gene Information

• Locus tag: VEA_001276
• ID: 8559588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1450318
• End bp: 1450950
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 646408945
• Product: transcriptional regulator VpsT
• Protein accession: YP_003288424
• Protein GI: 262396571
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGC CTGAAGTCCT AATGCTCACT CAACAAAGTT TACAGAGTGA AAACTTTAAG 
GAAATGCTTT CTAAAAATAT AGAAACTAAA ATAACGATCA TAGATACTAA AAACCCTAGT 
TATCACGAAC TCATTCCGGA ACGCTACTTT TTGCTTGTTG ATTTTTCAGT TGAGATTCCA 
TCCGAAACTT TAGTTTATTT AAAAGATAGT AATAAAGTAC TAGGAACCAT AATGCTTAAT 
TTAGGTTATG ACTTAGACAC AGAAGAACTC GCCTCATGGC CGCATGTAAA GGGTATATTC 
GGTCCGGGAG ACTCTATGGA CAAGGTGTGT CAGGGGTTAA AAGCAATAAT AAAAGGAGAT 
AATTGGCTGT CTCGAAGATT ACTGGATCAG CTGGTTAATT ATTATCGAGG AAAAGAAGCG 
AATAGCATTA TTGAGCCTGC TATCGAGGTA GAGCTTACTC GGCGTGAAAT TCAAGTTTTA 
AAAATGTTGA AAGAAGGAGG CTCAAATATG GAAATTGCTG ATTCTTTATT TATCAGTGAG 
CATACTATTA AATCACATCT ATACAATATT TTTAGAAAGT TAGAAGTAAA GAACCGTACG 
CAAGCAACAA GTTGGGCTAG GCGAAATCTG TAG 

 

Protein sequence

MEKPEVLMLT QQSLQSENFK EMLSKNIETK ITIIDTKNPS YHELIPERYF LLVDFSVEIP 
SETLVYLKDS NKVLGTIMLN LGYDLDTEEL ASWPHVKGIF GPGDSMDKVC QGLKAIIKGD 
NWLSRRLLDQ LVNYYRGKEA NSIIEPAIEV ELTRREIQVL KMLKEGGSNM EIADSLFISE 
HTIKSHLYNI FRKLEVKNRT QATSWARRNL