Gene Shew185_0840 details

Gene Information

• Locus tag: Shew185_0840
• ID: 5369717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 998201
• End bp: 998866
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640829035
• Product: response regulator receiver protein
• Protein accession: YP_001365057
• Protein GI: 152999376
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCACAA TTAATGAATT AGTTTTTTTA CATCAAATGG CGGCACCATG TCATTTAGCG 
TTACTCGCTG AATCCATAGG CTTGAAAACT CGTATCGTTA AGCATGCGGC GGAATTAGAT 
TTAGATAAGA GTCGTCGAAG TTTTTATCTG ATCACCCAAA AAGGCGCTGC ACTCGATAAC 
AAGGGGATCC CTTTGTTGGC TTCGCGCTTA GTGTCACATT TTCCCGTGGC GCTGTACCAA 
GTTGAACGGG ATTCCTTAGA TCAAGAGTCC GCTATGTTAC TTGGCATTCG AGGCATTTTA 
TTTGCCGATC AACGTTTGGA TTTGATGTTG ACGGGTTTGC GTAAAATGGT GGCAGAGGAG 
TTGTGGTACG ACAGAACATT ACTGAGTAAA GTGTTCCGTC GTGTAGTACA AAAGCTCGAT 
GGCAATAATG AGATGCTCTC CGATACAGTG GCTATGCTAC AGATGCTGAC TTCCCGTGAG 
CGCACTATTA TTCAATTTGT GTCGAGTGGC GCGAGGAATA AAGAAATCGC CCACAGATTG 
TGCATCAGCG AACATACGGT GAAGGCACAT ATTTCCTCTA TCTTCCGTAA GACCCAGTCC 
CGTAATCGTG TGGAGTTGTT GCGTTGGGCA CAAACCTATC AGACCCACTT CGAGCTGTGT 
AGCTAG 

 

Protein sequence

MSTINELVFL HQMAAPCHLA LLAESIGLKT RIVKHAAELD LDKSRRSFYL ITQKGAALDN 
KGIPLLASRL VSHFPVALYQ VERDSLDQES AMLLGIRGIL FADQRLDLML TGLRKMVAEE 
LWYDRTLLSK VFRRVVQKLD GNNEMLSDTV AMLQMLTSRE RTIIQFVSSG ARNKEIAHRL 
CISEHTVKAH ISSIFRKTQS RNRVELLRWA QTYQTHFELC S