More than 300 homologs were found in PanDaTox collection
for query gene Rleg_0280 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  100 
 
 		 245 aa  490  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal  1 
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  85.48 
 
 		 260 aa  417  1e-116  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal  1 
 
 
-
 
NC_009668  Oant_3972  two component LuxR family transcriptional regulator  49.12 
 
 		 251 aa  202  3e-51  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.111106  n/a   
 
 
-
 
NC_011371  Rleg2_6421  two component transcriptional regulator, LuxR family  35.29 
 
 		 251 aa  94  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  1 
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  30.67 
 
 		 342 aa  90.9  2e-17  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  36.02 
 
 		 243 aa  90.9  2e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  32.13 
 
 		 227 aa  90.1  3e-17  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  30.84 
 
 		 258 aa  89.7  4e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  30.37 
 
 		 255 aa  89.4  5e-17  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  30.37 
 
 		 255 aa  89.4  5e-17  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  29.33 
 
 		 267 aa  87.8  1e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  27.35 
 
 		 258 aa  87  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.173155 
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  31.53 
 
 		 351 aa  86.7  3e-16  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
NC_011369  Rleg2_3999  transcriptional regulator, LuxR family  26.23 
 
 		 260 aa  84  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0000000117104  normal  1 
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  31.07 
 
 		 259 aa  84  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal  1 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  37.16 
 
 		 227 aa  83.2  0.000000000000003  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  28.57 
 
 		 214 aa  82.4  0.000000000000006  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  28.57 
 
 		 214 aa  82.4  0.000000000000006  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  31.76 
 
 		 253 aa  80.9  0.00000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  35.03 
 
 		 275 aa  79.7  0.00000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  31.51 
 
 		 201 aa  79.3  0.00000000000005  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  29.69 
 
 		 267 aa  79.3  0.00000000000006  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  29.11 
 
 		 218 aa  79  0.00000000000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1961  response regulator receiver protein  30.56 
 
 		 247 aa  79  0.00000000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0316  LuxR family transcriptional regulator  30.84 
 
 		 213 aa  77.8  0.0000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.155222  n/a   
 
 
-
 
NC_009428  Rsph17025_0978  two component LuxR family transcriptional regulator  31.22 
 
 		 247 aa  77  0.0000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.159022  normal  1 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  32 
 
 		 248 aa  77.8  0.0000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_4328  transcriptional regulator, LuxR family  26.02 
 
 		 260 aa  77  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00000000127099  normal  0.0225245 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  27.98 
 
 		 209 aa  76.6  0.0000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  33.48 
 
 		 221 aa  77  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  33.78 
 
 		 212 aa  76.6  0.0000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  29 
 
 		 229 aa  74.7  0.000000000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.190475 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  35.47 
 
 		 221 aa  74.7  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  29.25 
 
 		 210 aa  74.7  0.000000000001  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  28.18 
 
 		 232 aa  73.9  0.000000000002  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  33.57 
 
 		 220 aa  73.9  0.000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  28.9 
 
 		 209 aa  74.3  0.000000000002  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_009636  Smed_2837  response regulator receiver protein  27.12 
 
 		 262 aa  73.9  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00000311945  normal  0.812847 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  29.96 
 
 		 221 aa  73.2  0.000000000003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  29.77 
 
 		 221 aa  73.2  0.000000000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  33.57 
 
 		 224 aa  72.8  0.000000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  27.17 
 
 		 241 aa  73.2  0.000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  32.45 
 
 		 216 aa  72.4  0.000000000005  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  28.77 
 
 		 210 aa  72.4  0.000000000006  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  27.23 
 
 		 219 aa  72.4  0.000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  33.53 
 
 		 251 aa  71.2  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  32.42 
 
 		 251 aa  70.5  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  30.99 
 
 		 216 aa  70.5  0.00000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_009620  Smed_4816  response regulator receiver protein  37.3 
 
 		 248 aa  70.1  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.890736  normal  0.794324 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  30.77 
 
 		 220 aa  69.7  0.00000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  36.03 
 
 		 206 aa  69.7  0.00000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  25.34 
 
 		 221 aa  69.7  0.00000000004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  31.36 
 
 		 219 aa  69.3  0.00000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  32.45 
 
 		 215 aa  68.9  0.00000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.463895 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  29.11 
 
 		 223 aa  68.9  0.00000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  29.09 
 
 		 211 aa  68.6  0.00000000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  35.29 
 
 		 224 aa  67.8  0.0000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  34.39 
 
 		 211 aa  68.2  0.0000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  30.07 
 
 		 215 aa  67.4  0.0000000002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  30.38 
 
 		 241 aa  66.6  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  27.98 
 
 		 212 aa  67  0.0000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  29.09 
 
 		 209 aa  67  0.0000000003  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  32.37 
 
 		 215 aa  66.6  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  32.89 
 
 		 209 aa  66.6  0.0000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  29.25 
 
 		 219 aa  65.9  0.0000000006  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  28.38 
 
 		 219 aa  65.9  0.0000000006  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  32.03 
 
 		 228 aa  65.5  0.0000000008  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  32.09 
 
 		 209 aa  65.1  0.0000000009  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  29.41 
 
 		 215 aa  65.1  0.0000000009  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1531  LuxR family DNA-binding response regulator  32.17 
 
 		 219 aa  65.1  0.000000001  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000956559  n/a   
 
 
-
 
NC_009901  Spea_0633  LuxR family transcriptional regulator  33.1 
 
 		 224 aa  64.7  0.000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  30.36 
 
 		 219 aa  65.1  0.000000001  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  26.39 
 
 		 217 aa  64.3  0.000000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_009050  Rsph17029_3701  two component LuxR family transcriptional regulator  32.26 
 
 		 253 aa  63.9  0.000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.567008  normal  0.770716 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  33.11 
 
 		 215 aa  63.9  0.000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_008752  Aave_2497  two component LuxR family transcriptional regulator  34.64 
 
 		 229 aa  63.9  0.000000002  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.000315398  normal  0.0281112 
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  31.14 
 
 		 222 aa  63.5  0.000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  27.54 
 
 		 223 aa  63.2  0.000000003  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  28.44 
 
 		 219 aa  63.5  0.000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_009831  Ssed_3945  LuxR family transcriptional regulator  29.93 
 
 		 221 aa  63.5  0.000000003  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00801334  normal  0.811932 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  28.04 
 
 		 221 aa  63.5  0.000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  28.22 
 
 		 237 aa  63.2  0.000000004  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  28.93 
 
 		 217 aa  63.2  0.000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  31.41 
 
 		 211 aa  63.2  0.000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  34.46 
 
 		 214 aa  63.2  0.000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  31.61 
 
 		 215 aa  62.8  0.000000004  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  28.93 
 
 		 217 aa  63.2  0.000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  27.35 
 
 		 219 aa  63.2  0.000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  29.38 
 
 		 216 aa  62.8  0.000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  32.05 
 
 		 204 aa  62.8  0.000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_013131  Caci_8454  two component transcriptional regulator, LuxR family  34.64 
 
 		 248 aa  62.8  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0223663  hitchhiker  0.00000372445 
 
 
-
 
NC_010682  Rpic_1028  two component transcriptional regulator, LuxR family  29.78 
 
 		 222 aa  62.8  0.000000005  Ralstonia pickettii 12J  Bacteria  normal  0.146412  normal  0.260968 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  25.46 
 
 		 252 aa  62.4  0.000000006  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  26.98 
 
 		 245 aa  62.4  0.000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  28.44 
 
 		 220 aa  62  0.000000008  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  28.11 
 
 		 219 aa  62  0.000000008  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  26.01 
 
 		 220 aa  62  0.000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  28.57 
 
 		 215 aa  62  0.000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007489  RSP_4133  two component LuxR family transcriptional regulator  30.88 
 
 		 240 aa  62  0.000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  27.44 
 
 		 244 aa  62  0.000000009  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
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