| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1028 |
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| Symbol | |
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| ID | 6289155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1088810 |
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| End bp | 1089478 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624600 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001898608 |
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| Protein GI | 187928121 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.146412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.260968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTG TTTTGATCGA AGCCCATCCG TTGGTGCGTA CAGGCATTGC GCACCTGCTA
CGGACGCTCA AAGGCGTCAC CGGCGTCACT GTCGTCGAGC CAGACGAAGG GATGTTCGAC
GCCATCGAAA CCAATGCCGA CGCGGGTCTT CTTGTCATCG GCCTGCCGCT GCCACATCTC
GATGAGTTGT CGGCCATCGG CGAGATCATG CACCGGCCGC ACGCGCGCCA CGTGGTCGTG
CTGGCTGAAT CCGAATCGCC CGACATCATC CGTACGCTGA TGCAGATGGG ATTGTCCGGG
TACACGCTCA AGCATTCGCC GGGCGAAGTC ATCGCGGCTT CGCTGGAACT GGTGCTGGTG
GGTGGCCAAT ACATTCCGGC CAGCGCACTG CTGCCGGAAT CGCGCCTGGA CGGTGCGCCC
AACCCTGCGC TCGCTGGCGA CCCTCAGACC GATCCGAAGC TGCTCGGCAT TACGCCCCGG
CAGTACGAGA TTCTGGTGCT GCTCTCGCGC GGGCATCCGG TCAAGACGAT CAGCCGCATG
CTGAACATCT CCGAGGTGAC AGCCAAGGCG CATATCAGCA CCCTGTATCG GCGCCTGAAA
GTACGCAGCC GTACCGAGGC CGTGTACGTC GCCAACCAGC GCGGCGCGCG CCTGCTGTCG
GTCGCCTGA
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| Protein sequence | MNTVLIEAHP LVRTGIAHLL RTLKGVTGVT VVEPDEGMFD AIETNADAGL LVIGLPLPHL
DELSAIGEIM HRPHARHVVV LAESESPDII RTLMQMGLSG YTLKHSPGEV IAASLELVLV
GGQYIPASAL LPESRLDGAP NPALAGDPQT DPKLLGITPR QYEILVLLSR GHPVKTISRM
LNISEVTAKA HISTLYRRLK VRSRTEAVYV ANQRGARLLS VA
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