Gene Haur_1309 details

Gene Information

• Locus tag: Haur_1309
• ID: 5733202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 1519839
• End bp: 1520459
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641278449
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_001544085
• Protein GI: 159897838
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000148999
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCA TTTTGGTGGT TGATGATCAT CCGGTGGTGC GCGAGGGCTT GGTGGCAATT 
CTCAGCACCC AAGCCGATTT TTCCGTGGTT GGTGAGGCTA GCGCTGGGCT GCAAGCTGTC 
GAATTGTGTC AGCAATTGCA ACCTGATCTG GTATTGCTCG ACCTTGAGTT GCCTGATCTC 
GATGGAGTGG CGGTGCTTGA GCGGCTTGAT TTGGCGGCGA CCAACCGACG CGTGTTGGTA 
TTTACCGCGT TTGATACCGA TGAACGGATT ATTGGCGCGG TGCGGGCTGG TGCTCAGGGC 
TATTTGCTCA AAGGCGCTCC GCGTGATGAA TTATTTGCAG CAATTCGCTT GATTCATGCT 
GGTGGCTCGA CCTTGCACCC CTTGATTGCC TCGAAATTGT TGCGCCAAGT GCAGCGCGAT 
ACAACCTTGG TTGAATTAAC GCCGCGTGAG CATGAAGTAT TGCAACATTT AGCCCAAGGC 
TTTGCTAATA AGCAAATTGC CTACCAACTT AATATTACCG AGCGCACAGT TAAATTCCAT 
CTGAATAGTA TTTTTCAAAA GCTTGGGGCG CACAATCGCA CCGAGGCTGT GGCGATTGCC 
TATGAACGCC AATTAATTTA G 

 

Protein sequence

MIRILVVDDH PVVREGLVAI LSTQADFSVV GEASAGLQAV ELCQQLQPDL VLLDLELPDL 
DGVAVLERLD LAATNRRVLV FTAFDTDERI IGAVRAGAQG YLLKGAPRDE LFAAIRLIHA 
GGSTLHPLIA SKLLRQVQRD TTLVELTPRE HEVLQHLAQG FANKQIAYQL NITERTVKFH 
LNSIFQKLGA HNRTEAVAIA YERQLI