Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0179 |
Symbol | |
ID | 3520372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 188462 |
End bp | 189121 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282646 |
Product | LuxR family DNA-binding response regulator |
Protein accession | YP_266947 |
Protein GI | 71279910 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAGC CAGAAAAAAT AATAATAGCT GACGATCATC CCTTATTTAG ACAAGCTTTA TTAGGGACAT TAAAAGCTAA GCTAACTTAT ACGGTGTGGC TTGAAGCGCA AACAATTGAA GAGCTTGAGC AACAACTTAC TAACAATAAT GATAGTGACT TGCTGTTACT AGATTTAAAT ATTCCTGGCG CCCATGGCTT TAATACCCTA ATCCATGTAC GTAATCATTT TCCTCAAATT CCTGTTGTTA TCGTATCCGC TCATGAAGAT CATGACACCA TAAGCAAAGC AATGTCTTAT GGTGCTGCTG GTTTTGTACC AAAATCAACG CCTGTTGATG ACATTTATTC AGCTATTGTT GCGGTGTTAT CAGGAGATAC CTGGTTACCT GCTTCTTTTG AGCAAAAACA AAGAGATAAT AGTGATGGGG ACATTGCTGA ACGTGTTGCC AGTTTAACTC AGCAGCAATA TCGTATATTA ATGATGTTCG CTCAAGGCAT GTTAAACAAA CAAATTGCTT ATGATTTAAA TGTATCTGAG GCAACAATTA AAGCACATGC TACCGCTATT TTTAGAAAAT TAGACGTTCG TAATCGCACG CAAGCCGTTA TTGCGATCGC CCAACTAAGT TTAACTGAAA CTGGGTTTAA ACAGGGTTAA
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Protein sequence | MIQPEKIIIA DDHPLFRQAL LGTLKAKLTY TVWLEAQTIE ELEQQLTNNN DSDLLLLDLN IPGAHGFNTL IHVRNHFPQI PVVIVSAHED HDTISKAMSY GAAGFVPKST PVDDIYSAIV AVLSGDTWLP ASFEQKQRDN SDGDIAERVA SLTQQQYRIL MMFAQGMLNK QIAYDLNVSE ATIKAHATAI FRKLDVRNRT QAVIAIAQLS LTETGFKQG
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